BLASTX nr result

ID: Coptis23_contig00022282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022282
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40787.3| unnamed protein product [Vitis vinifera]               91   1e-20
ref|XP_002510745.1| conserved hypothetical protein [Ricinus comm...    90   3e-18
ref|XP_003556620.1| PREDICTED: uncharacterized protein LOC100798...    82   1e-16
ref|XP_002308370.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-16
ref|XP_003530323.1| PREDICTED: uncharacterized protein LOC100820...    72   2e-14

>emb|CBI40787.3| unnamed protein product [Vitis vinifera]
          Length = 1477

 Score = 90.9 bits (224), Expect(2) = 1e-20
 Identities = 42/91 (46%), Positives = 62/91 (68%)
 Frame = +3

Query: 138  VNQVDKVRELWSKDDNFRNEYIRCNRLSTVRRLGTLDGCRLGPDEDPPILHNVRRDRVGT 317
            VN+V+ + ELW+ +D FR EY+RCN  ST+RRL TLDG  LGPDE+PP++ N   +R+G 
Sbjct: 1156 VNEVETIMELWNNNDEFRKEYVRCNTRSTLRRLRTLDGRSLGPDEEPPVIPNFLNERIGR 1215

Query: 318  APPASVKANLISPVLTLKEEKTVLPLGPENA 410
            +  A  K + +  V T++ EK ++P   E+A
Sbjct: 1216 SLFAPTKDSSVLIVSTVEREKQMVPATAESA 1246



 Score = 33.5 bits (75), Expect(2) = 1e-20
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 50   NKYFWMFKDDQTKAGDYGFSGDKE 121
            NKYF M+KD+   A DY  +GDKE
Sbjct: 1126 NKYFRMYKDNLKAANDYASAGDKE 1149


>ref|XP_002510745.1| conserved hypothetical protein [Ricinus communis]
            gi|223551446|gb|EEF52932.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1553

 Score = 90.1 bits (222), Expect(2) = 3e-18
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = +3

Query: 138  VNQVDKVRELWSKDDNFRNEYIRCNRLSTVRRLGTLDGCRLGPDEDPPILHNVRRDRVGT 317
            VNQV++V ELW+ +D FR +YIRCN  STVRRL TLDG  LGPDE+PP++ N   +R   
Sbjct: 1248 VNQVERVMELWNNNDEFRKDYIRCNLRSTVRRLRTLDGRSLGPDEEPPVIPNFVSERF-- 1305

Query: 318  APPASVKANLISPVLTLKEEKTVLPLGPEN 407
                  + N++  + TL+EEK + P   EN
Sbjct: 1306 -----ARRNVVPSISTLQEEKIIAPTETEN 1330



 Score = 26.2 bits (56), Expect(2) = 3e-18
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 50   NKYFWMFKDDQTKAGDYGFSGDKEKQHCHC 139
            +K F+ +K+D   A D    GD+ +   HC
Sbjct: 1218 HKNFYKYKEDAKAASDLASKGDQGELQYHC 1247


>ref|XP_003556620.1| PREDICTED: uncharacterized protein LOC100798700 [Glycine max]
          Length = 1501

 Score = 82.0 bits (201), Expect(2) = 1e-16
 Identities = 40/92 (43%), Positives = 59/92 (64%)
 Frame = +3

Query: 138  VNQVDKVRELWSKDDNFRNEYIRCNRLSTVRRLGTLDGCRLGPDEDPPILHNVRRDRVGT 317
            V+QV+++ ELW+K+D FR +Y+RCN  ST+RRL TLDG  LGPDE+PP++ NV  +R   
Sbjct: 1184 VDQVERIMELWNKNDGFRRDYVRCNTRSTLRRLQTLDGRSLGPDEEPPVIPNVITERASK 1243

Query: 318  APPASVKANLISPVLTLKEEKTVLPLGPENAQ 413
              P  +++       TL++EK   P    N +
Sbjct: 1244 NIPMVLQS-------TLEQEKKSTPTESVNVK 1268



 Score = 29.3 bits (64), Expect(2) = 1e-16
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 50   NKYFWMFKDDQTKAGDYGFSGDKEKQHCHC 139
            +K FW ++D   KA +    G KE+  C C
Sbjct: 1154 SKNFWEYRDAANKAQELAAGGKKEELQCFC 1183


>ref|XP_002308370.1| predicted protein [Populus trichocarpa] gi|222854346|gb|EEE91893.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 75.9 bits (185), Expect(2) = 4e-16
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
 Frame = +3

Query: 141 NQVDKVRELWSKDDNFRNEYIRCNRLSTVRRLGTLDGCRLGPDEDPPILHNVRRDR---- 308
           NQV++V ELW+ +D FR EY+  N  +T+RRL TLDG  LGPDE PPI+ NV   R    
Sbjct: 154 NQVERVMELWNNNDEFRKEYMSSNMRNTLRRLRTLDGRALGPDEQPPIIPNVVSQRATKH 213

Query: 309 -VGTAPPASVKANLISPVLTLK-EEKTVLPLGPENAQ 413
            V  + PA      ++PV T + +EK+   LG +  Q
Sbjct: 214 NVAPSAPALEVEKPVTPVETQRIDEKSTAKLGDKKNQ 250



 Score = 33.5 bits (75), Expect(2) = 4e-16
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 50  NKYFWMFKDDQTKAGDYGFSGDKEKQHCHC 139
           +K+F+ +KDD T A +    GDKE+   HC
Sbjct: 123 SKFFYKYKDDLTAATNLALKGDKEELQRHC 152


>ref|XP_003530323.1| PREDICTED: uncharacterized protein LOC100820077 [Glycine max]
          Length = 1296

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +3

Query: 138  VNQVDKVRELWSKDDNFRNEYIRCNRLSTVRRLGTLDGCRLGPDEDPPILHNVRRDRVGT 317
            V++V+++ ELW+K+D FR +Y+RCN  ST+RRL TLDG  LGPDE+P ++ N   +R   
Sbjct: 978  VDEVERIMELWNKNDEFRRDYVRCNTRSTLRRLQTLDGRSLGPDEEPLVMPNAITERASK 1037

Query: 318  APP 326
              P
Sbjct: 1038 NIP 1040



 Score = 31.2 bits (69), Expect(2) = 2e-14
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 50   NKYFWMFKDDQTKAGDYGFSGDKEKQHCHC 139
            +K FW ++D  TKA +    G KE+  C C
Sbjct: 948  SKNFWEYRDAATKAQELAAGGKKEELQCFC 977


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