BLASTX nr result

ID: Coptis23_contig00022281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022281
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002885127.1| proton-dependent oligopeptide transport fami...   156   2e-36
ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g...   155   4e-36
emb|CBI36110.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|NP_188239.1| major facilitator protein [Arabidopsis thaliana...   151   6e-35

>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/117 (64%), Positives = 90/117 (76%)
 Frame = +3

Query: 3   GIRPCSLAFGAAQLIETENPKSKRVVQSFFNWYYVSAATSVLIAMTVIVYIQDHFGWKVG 182
           G+RPCS+AFGA QL    NPK++RV++SFF WYY SAA SVLI++T IVYIQDH GWKVG
Sbjct: 41  GVRPCSIAFGADQLDNKSNPKNERVLESFFGWYYASAAISVLISLTAIVYIQDHLGWKVG 100

Query: 183 FGVPAIIMFFSGFLFMLASSTYIKAKPNKSLFTGFAQVTVASIKNKHIALPSKCEDG 353
           FGVPAI+MF S  LF  AS  Y+K KP+KSLFTGF QV V + KN+ +A P +  DG
Sbjct: 101 FGVPAILMFLSALLFFFASPFYVKQKPSKSLFTGFIQVPVVAYKNRKLAFPPRDSDG 157


>ref|XP_002885127.1| proton-dependent oligopeptide transport family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330967|gb|EFH61386.1|
           proton-dependent oligopeptide transport family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 593

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/111 (63%), Positives = 89/111 (80%)
 Frame = +3

Query: 3   GIRPCSLAFGAAQLIETENPKSKRVVQSFFNWYYVSAATSVLIAMTVIVYIQDHFGWKVG 182
           GIRPCSLAFGA QL   ENPK++RV++SFF WYY S++ +VLIA TVIVYIQDH GWK+G
Sbjct: 159 GIRPCSLAFGADQLDNKENPKNERVLESFFGWYYASSSVAVLIAFTVIVYIQDHLGWKIG 218

Query: 183 FGVPAIIMFFSGFLFMLASSTYIKAKPNKSLFTGFAQVTVASIKNKHIALP 335
           FG+PAI+M F+GFLF+ AS  Y+K   +KSLFTG AQV  A+  N+++ LP
Sbjct: 219 FGIPAILMLFAGFLFVFASPLYVKRNVSKSLFTGLAQVVAAAYVNRNLTLP 269


>ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g52190-like [Vitis
           vinifera]
          Length = 584

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/117 (62%), Positives = 92/117 (78%)
 Frame = +3

Query: 3   GIRPCSLAFGAAQLIETENPKSKRVVQSFFNWYYVSAATSVLIAMTVIVYIQDHFGWKVG 182
           G+RPCSLAFGA QL + +NPK++RV++SFF+WYY SAA SV+IA+T IVYIQ H GW+VG
Sbjct: 150 GVRPCSLAFGADQLDKRDNPKNERVLESFFSWYYASAALSVVIALTGIVYIQVHLGWRVG 209

Query: 183 FGVPAIIMFFSGFLFMLASSTYIKAKPNKSLFTGFAQVTVASIKNKHIALPSKCEDG 353
           FGVPAI+MFF+  LF LAS  YIK K ++SL TGF QV V + KN+ +A P +  DG
Sbjct: 210 FGVPAILMFFAALLFFLASPFYIKQKASRSLLTGFVQVLVVAYKNRKLAFPPRNTDG 266


>emb|CBI36110.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/117 (62%), Positives = 92/117 (78%)
 Frame = +3

Query: 3   GIRPCSLAFGAAQLIETENPKSKRVVQSFFNWYYVSAATSVLIAMTVIVYIQDHFGWKVG 182
           G+RPCSLAFGA QL + +NPK++RV++SFF+WYY SAA SV+IA+T IVYIQ H GW+VG
Sbjct: 150 GVRPCSLAFGADQLDKRDNPKNERVLESFFSWYYASAALSVVIALTGIVYIQVHLGWRVG 209

Query: 183 FGVPAIIMFFSGFLFMLASSTYIKAKPNKSLFTGFAQVTVASIKNKHIALPSKCEDG 353
           FGVPAI+MFF+  LF LAS  YIK K ++SL TGF QV V + KN+ +A P +  DG
Sbjct: 210 FGVPAILMFFAALLFFLASPFYIKQKASRSLLTGFVQVLVVAYKNRKLAFPPRNTDG 266


>ref|NP_188239.1| major facilitator protein [Arabidopsis thaliana]
           gi|310947330|sp|Q8LPL2.2|PTR32_ARATH RecName:
           Full=Probable peptide/nitrate transporter At3g16180
           gi|332642260|gb|AEE75781.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 591

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/111 (62%), Positives = 87/111 (78%)
 Frame = +3

Query: 3   GIRPCSLAFGAAQLIETENPKSKRVVQSFFNWYYVSAATSVLIAMTVIVYIQDHFGWKVG 182
           GIRPCSLAFGA QL   ENPK++RV++SFF WYY S++ +VLIA TVIVYIQDH GWK+G
Sbjct: 158 GIRPCSLAFGADQLDNKENPKNERVLESFFGWYYASSSVAVLIAFTVIVYIQDHLGWKIG 217

Query: 183 FGVPAIIMFFSGFLFMLASSTYIKAKPNKSLFTGFAQVTVASIKNKHIALP 335
           FG+PAI+M  +GFLF+ AS  Y+K   +KSLFTG AQV  A+   +++ LP
Sbjct: 218 FGIPAILMLLAGFLFVFASPLYVKRDVSKSLFTGLAQVVAAAYVKRNLTLP 268


Top