BLASTX nr result

ID: Coptis23_contig00022270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022270
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trich...    78   7e-13
ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichoca...    77   2e-12
ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002519373.1| leucine-rich repeat containing protein, puta...    76   3e-12

>ref|XP_002302959.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844685|gb|EEE82232.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1285

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +3

Query: 153  GLQNLASLETLNIQFCPRMESLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNL 329
            GL+NL SLE L IQ C R+ SLP  GL GL+SL  L I  C+  ASLS G+R+LTAL++L
Sbjct: 849  GLRNLTSLEVLEIQTCRRLNSLPMNGLCGLSSLRRLSIHICDQFASLSEGVRHLTALEDL 908

Query: 330  HLARCEKMHILEDDMDGLTSLRTLKI 407
             L  C +++ L + +  L+SLR+L I
Sbjct: 909  SLFGCPELNSLPESIQHLSSLRSLSI 934



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +3

Query: 153  GLQNLASLETLNIQFCPRMESLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNL 329
            GLQNL SLE L I  C R+ SLP   L  L+SL  L I  C+  ASLS G+R+LTAL++L
Sbjct: 1117 GLQNLTSLEILEILSCKRLNSLPMNELCSLSSLRHLSIHFCDQFASLSEGVRHLTALEDL 1176

Query: 330  HLARCEKMHILEDDMDGLTSLRTLKIE 410
             L  C +++ L + +  +TSLR+L I+
Sbjct: 1177 SLFGCHELNSLPESIQHITSLRSLSIQ 1203


>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +3

Query: 153 GLQNLASLETLNIQFCPRMESLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNL 329
           GL+NL SLE L+I FC R+  LP  GL GL+SL  LKI  C+   SL+ G+R+LTAL++L
Sbjct: 358 GLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSLTEGVRHLTALEDL 417

Query: 330 HLARCEKMHILEDDMDGLTSLRTLKI 407
            L  C +++ L + +  LTSL++L I
Sbjct: 418 ELGNCPELNSLPESIQHLTSLQSLSI 443


>ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844656|gb|EEE82203.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1088

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +3

Query: 153  GLQNLASLETLNIQFCPRMESLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNL 329
            GL+NL SLE L+I FC R+  LP  GL GL+SL  LKI  C+   SL+ G+R+LTAL++L
Sbjct: 968  GLRNLNSLEVLDIWFCGRLNCLPMDGLCGLSSLRRLKIQYCDKFTSLTEGVRHLTALEDL 1027

Query: 330  HLARCEKMHILEDDMDGLTSLRTLKI 407
             L  C +++ L + +  LTSL++L I
Sbjct: 1028 ELGNCPELNSLPESIQHLTSLQSLFI 1053


>ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|222843441|gb|EEE80988.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = +3

Query: 153 GLQNLASLETLNIQFCPRMESLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNL 329
           GLQNL SLE+L+I  C  ++SLP  GL GL SL  L +  C+ LASLS G++YLTAL++L
Sbjct: 451 GLQNLNSLESLHINSCGGLKSLPINGLCGLHSLRRLHVLGCDKLASLSKGVQYLTALEHL 510

Query: 330 HLARCEKMHILEDDMDGLTSLRTLKI 407
           ++  C +++ L   +  LTSLR+L I
Sbjct: 511 YIHGCSQLNSLPQSIQHLTSLRSLTI 536


>ref|XP_002519373.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223541440|gb|EEF42990.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1208

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
 Frame = +3

Query: 156  LQNLASLETLNIQFCPRMESLPEQGLGGLTSLVSLKISDCESLASLS-GMRYLTALQNLH 332
            L NL SLE + I+ CPR++ LP +G   LTSL +L+I  CE+L +LS G++YLTAL+ L 
Sbjct: 1012 LPNLTSLELIKIEECPRLQCLPGEGFRALTSLRTLRIYRCENLKTLSQGIQYLTALEELR 1071

Query: 333  LARCEKMHILEDDMDGLTSLRTL 401
            +  CEK+H+ +D M  L  L+ L
Sbjct: 1072 IKSCEKLHLSDDGMQ-LQDLKNL 1093


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