BLASTX nr result

ID: Coptis23_contig00022268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022268
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    59   5e-07
ref|XP_002319349.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = -2

Query: 265 AFNEIRKKRNKIGWSRLVWNKAVHPRVADNGWKLVQNCAATQEMVRTKGIHLASRCALPC 86
           A+ ++R+ R+ + W  +VW K   PR +   W +VQ    TQ+ +   GIH  +RC+L C
Sbjct: 147 AWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSL-C 205

Query: 85  QNVTEDLNHLLWSCTFANQLW 23
               ED NHL + C++   +W
Sbjct: 206 LRNNEDHNHLFFECSYTKAIW 226


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/81 (34%), Positives = 44/81 (54%)
 Frame = -2

Query: 265  AFNEIRKKRNKIGWSRLVWNKAVHPRVADNGWKLVQNCAATQEMVRTKGIHLASRCALPC 86
            A+ ++R+ R  + W  +VW K   PR +   W +VQ    TQ+ +   GIH  +RC+L C
Sbjct: 862  AWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSL-C 920

Query: 85   QNVTEDLNHLLWSCTFANQLW 23
                ED NHL + C++   +W
Sbjct: 921  LRNNEDHNHLFFECSYTKAIW 941


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/81 (34%), Positives = 43/81 (53%)
 Frame = -2

Query: 265 AFNEIRKKRNKIGWSRLVWNKAVHPRVADNGWKLVQNCAATQEMVRTKGIHLASRCALPC 86
           A+ ++R+ R  + W  +VW K   PR +   W  VQ    TQ+ +   GIH  +RC+L C
Sbjct: 329 AWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSL-C 387

Query: 85  QNVTEDLNHLLWSCTFANQLW 23
               ED NHL + C++   +W
Sbjct: 388 LRNNEDHNHLFFECSYTKAIW 408


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = -2

Query: 238 NKIGWSRLVWNKAVHPRVADNGWKLVQNCAATQEMVRTKGIHLASRCALPCQNVTEDLNH 59
           N   W++L+W+K + P  +   W+L+ +   T E ++ +G  L S C+L C    E   H
Sbjct: 108 NTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSL-CGTHVETSFH 166

Query: 58  LLWSCTFANQLWLWVAS 8
           L + C FA ++W W AS
Sbjct: 167 LFFECCFAFRIWCWFAS 183


>ref|XP_002319349.1| predicted protein [Populus trichocarpa] gi|222857725|gb|EEE95272.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/81 (34%), Positives = 44/81 (54%)
 Frame = -2

Query: 265 AFNEIRKKRNKIGWSRLVWNKAVHPRVADNGWKLVQNCAATQEMVRTKGIHLASRCALPC 86
           A+N I   R+K+ W  LVW+K   PR +   W +V    +TQ   R   +    +C L C
Sbjct: 22  AWNSIHPVRDKVDWWNLVWHKHAIPRFSFILWIVVHEALSTQNKFRCYSVIQTIQCHL-C 80

Query: 85  QNVTEDLNHLLWSCTFANQLW 23
           +   ED++HLL+ C F++ +W
Sbjct: 81  RGDREDVDHLLFDCPFSHHIW 101


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