BLASTX nr result

ID: Coptis23_contig00022257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022257
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera] gi...   231   3e-59
ref|XP_004155073.1| PREDICTED: transportin-3-like [Cucumis sativus]   229   2e-58
ref|XP_004138138.1| PREDICTED: transportin-3-like [Cucumis sativus]   229   2e-58
ref|XP_003549651.1| PREDICTED: transportin-3-like isoform 2 [Gly...   228   4e-58
ref|XP_003549650.1| PREDICTED: transportin-3-like isoform 1 [Gly...   228   4e-58

>ref|XP_002283854.1| PREDICTED: transportin-3 [Vitis vinifera]
           gi|297733855|emb|CBI15102.3| unnamed protein product
           [Vitis vinifera]
          Length = 960

 Score =  231 bits (590), Expect = 3e-59
 Identities = 113/127 (88%), Positives = 116/127 (91%)
 Frame = -1

Query: 385 MELQNTVKEALNVLYHHPDDSIRSQADNWLQDFQRTIDAWQVADNLLHDPSSNLETLIFC 206
           MELQNTVKEALN LYHHPDDS+R QAD WLQDFQRTIDAWQV+DNLLHD +SNLETLIFC
Sbjct: 1   MELQNTVKEALNALYHHPDDSVRMQADRWLQDFQRTIDAWQVSDNLLHDATSNLETLIFC 60

Query: 205 SQTLRSKVQRDFEELPSEAFRPLRDSLNALLKKLHKGSPVVRTQISIAVAALAVHVSVED 26
           SQTLRSKVQRDFEELPSEAFRPLRDSLN LLKK HKG P VRTQISIAVAALAVHV  ED
Sbjct: 61  SQTLRSKVQRDFEELPSEAFRPLRDSLNTLLKKFHKGPPKVRTQISIAVAALAVHVPAED 120

Query: 25  WGGGGIV 5
           WG GGIV
Sbjct: 121 WGDGGIV 127


>ref|XP_004155073.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 493

 Score =  229 bits (583), Expect = 2e-58
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = -1

Query: 385 MELQNTVKEALNVLYHHPDDSIRSQADNWLQDFQRTIDAWQVADNLLHDPSSNLETLIFC 206
           MELQNTVKEALN LYHHPDD+ R QAD WLQDFQRT+DAWQVADNLLH+P+SNLETLIFC
Sbjct: 1   MELQNTVKEALNALYHHPDDAFRMQADRWLQDFQRTLDAWQVADNLLHEPTSNLETLIFC 60

Query: 205 SQTLRSKVQRDFEELPSEAFRPLRDSLNALLKKLHKGSPVVRTQISIAVAALAVHVSVED 26
           SQTLRSKVQRDFEELPSEAF+PLRDSLN LL+K HKG P VRTQISIAVAALAVHV  +D
Sbjct: 61  SQTLRSKVQRDFEELPSEAFKPLRDSLNNLLRKFHKGPPKVRTQISIAVAALAVHVPADD 120

Query: 25  WGGGGIVN 2
           WG GGIVN
Sbjct: 121 WGEGGIVN 128


>ref|XP_004138138.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 968

 Score =  229 bits (583), Expect = 2e-58
 Identities = 110/128 (85%), Positives = 117/128 (91%)
 Frame = -1

Query: 385 MELQNTVKEALNVLYHHPDDSIRSQADNWLQDFQRTIDAWQVADNLLHDPSSNLETLIFC 206
           MELQNTVKEALN LYHHPDD+ R QAD WLQDFQRT+DAWQVADNLLH+P+SNLETLIFC
Sbjct: 1   MELQNTVKEALNALYHHPDDAFRMQADRWLQDFQRTLDAWQVADNLLHEPTSNLETLIFC 60

Query: 205 SQTLRSKVQRDFEELPSEAFRPLRDSLNALLKKLHKGSPVVRTQISIAVAALAVHVSVED 26
           SQTLRSKVQRDFEELPSEAF+PLRDSLN LL+K HKG P VRTQISIAVAALAVHV  +D
Sbjct: 61  SQTLRSKVQRDFEELPSEAFKPLRDSLNNLLRKFHKGPPKVRTQISIAVAALAVHVPADD 120

Query: 25  WGGGGIVN 2
           WG GGIVN
Sbjct: 121 WGEGGIVN 128


>ref|XP_003549651.1| PREDICTED: transportin-3-like isoform 2 [Glycine max]
          Length = 968

 Score =  228 bits (581), Expect = 4e-58
 Identities = 111/127 (87%), Positives = 116/127 (91%)
 Frame = -1

Query: 385 MELQNTVKEALNVLYHHPDDSIRSQADNWLQDFQRTIDAWQVADNLLHDPSSNLETLIFC 206
           M+LQNTVKEALN LYHHPDD++R QAD +LQDFQRT+DAWQVADNLLHDPSSNLETLIFC
Sbjct: 1   MDLQNTVKEALNALYHHPDDAVRMQADRYLQDFQRTLDAWQVADNLLHDPSSNLETLIFC 60

Query: 205 SQTLRSKVQRDFEELPSEAFRPLRDSLNALLKKLHKGSPVVRTQISIAVAALAVHVSVED 26
           SQTLRSKVQRDFEELPS AFRPLRDSLN LLKK HKG P VRTQISIAVAALAVHV  ED
Sbjct: 61  SQTLRSKVQRDFEELPSTAFRPLRDSLNTLLKKFHKGPPKVRTQISIAVAALAVHVPAED 120

Query: 25  WGGGGIV 5
           WG GGIV
Sbjct: 121 WGDGGIV 127


>ref|XP_003549650.1| PREDICTED: transportin-3-like isoform 1 [Glycine max]
          Length = 960

 Score =  228 bits (581), Expect = 4e-58
 Identities = 111/127 (87%), Positives = 116/127 (91%)
 Frame = -1

Query: 385 MELQNTVKEALNVLYHHPDDSIRSQADNWLQDFQRTIDAWQVADNLLHDPSSNLETLIFC 206
           M+LQNTVKEALN LYHHPDD++R QAD +LQDFQRT+DAWQVADNLLHDPSSNLETLIFC
Sbjct: 1   MDLQNTVKEALNALYHHPDDAVRMQADRYLQDFQRTLDAWQVADNLLHDPSSNLETLIFC 60

Query: 205 SQTLRSKVQRDFEELPSEAFRPLRDSLNALLKKLHKGSPVVRTQISIAVAALAVHVSVED 26
           SQTLRSKVQRDFEELPS AFRPLRDSLN LLKK HKG P VRTQISIAVAALAVHV  ED
Sbjct: 61  SQTLRSKVQRDFEELPSTAFRPLRDSLNTLLKKFHKGPPKVRTQISIAVAALAVHVPAED 120

Query: 25  WGGGGIV 5
           WG GGIV
Sbjct: 121 WGDGGIV 127


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