BLASTX nr result
ID: Coptis23_contig00022242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00022242
(730 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2... 78 2e-38
ref|XP_004160430.1| PREDICTED: peroxisome biogenesis protein 3-2... 67 1e-34
ref|XP_004137328.1| PREDICTED: peroxisome biogenesis protein 3-2... 67 4e-34
ref|XP_002317886.1| predicted protein [Populus trichocarpa] gi|2... 65 1e-31
ref|XP_002529562.1| amino acid transporter, putative [Ricinus co... 68 3e-31
>ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2 [Vitis vinifera]
gi|297734292|emb|CBI15539.3| unnamed protein product
[Vitis vinifera]
Length = 373
Score = 77.8 bits (190), Expect(3) = 2e-38
Identities = 42/58 (72%), Positives = 52/58 (89%), Gaps = 2/58 (3%)
Frame = +2
Query: 563 SAEFGNVMEVSLRSVVDALMNDV-GLQ-SGGNPSSGVPLAKLLPRIAQMGPLLLEEPS 730
SAEF NV++VSLR+VVDA++ D+ G+Q GG+PSSG+ LAKLLPR+AQMGPLLLEEPS
Sbjct: 288 SAEFINVIDVSLRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEPS 345
Score = 77.0 bits (188), Expect(3) = 2e-38
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = +1
Query: 1 TARGMGASYLLEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAATEVLKGKQL 180
TARG G+S+LLEE D DRH QQ FLA+AD+LS Y + LI NM AA EVLKGKQL
Sbjct: 159 TARGGGSSHLLEEADPIDRH---DQQKFLASADFLSNYSIPALISNMHAAAAEVLKGKQL 215
Query: 181 RDLF 192
RD+F
Sbjct: 216 RDVF 219
Score = 51.2 bits (121), Expect(3) = 2e-38
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +3
Query: 294 TVLQILKTFMNVGDLHHWMTYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGEA 473
T++QIL F++ G H+ + YL+P+D SY+ + S S+ D+S V K DQL+ E
Sbjct: 227 TIMQILDLFISTGKPHNLVDYLMPDDTKSYKPA----SPSNGDSSTPADVTKFDQLMVET 282
Query: 474 RAVL 485
RAVL
Sbjct: 283 RAVL 286
>ref|XP_004160430.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Cucumis sativus]
Length = 373
Score = 67.4 bits (163), Expect(3) = 1e-34
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +1
Query: 1 TARGMGASYLLEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAATEVLKGKQL 180
TARG+G+S+LLEE D DR QQ FLA +D+L YG+ LI +Q+A EVLK KQL
Sbjct: 159 TARGLGSSHLLEEADLIDRE---DQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRKQL 215
Query: 181 RDLF 192
RD+F
Sbjct: 216 RDVF 219
Score = 64.7 bits (156), Expect(3) = 1e-34
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Frame = +2
Query: 563 SAEFGNVMEVSLRSVVDALMNDV--GLQSGGNPSSGVPLAKLLPRIAQMGPLLLEEP 727
SAEFGN+ME SL VD LM ++ L G + +SG+PLA+L+PR+AQMG LLLE+P
Sbjct: 288 SAEFGNIMERSLEVGVDGLMEEMEASLAGGSSKASGIPLARLVPRVAQMGLLLLEDP 344
Score = 61.2 bits (147), Expect(3) = 1e-34
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +3
Query: 288 QETVLQILKTFMNVGDLHHWMTYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIG 467
+ET QI+K FM+ HHW+ Y++P D QS I + S+DD +V P NK DQL+
Sbjct: 225 RETTTQIIKIFMSTASPHHWLDYVMPGD----NQSSITDTLSTDDDAVAPNFNKFDQLMM 280
Query: 468 EARAVL 485
E RAVL
Sbjct: 281 ETRAVL 286
>ref|XP_004137328.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Cucumis sativus]
Length = 373
Score = 67.4 bits (163), Expect(3) = 4e-34
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +1
Query: 1 TARGMGASYLLEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAATEVLKGKQL 180
TARG+G+S+LLEE D DR QQ FLA +D+L YG+ LI +Q+A EVLK KQL
Sbjct: 159 TARGLGSSHLLEEADLIDRE---DQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRKQL 215
Query: 181 RDLF 192
RD+F
Sbjct: 216 RDVF 219
Score = 63.2 bits (152), Expect(3) = 4e-34
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Frame = +2
Query: 563 SAEFGNVMEVSLRSVVDALMNDV--GLQSGGNPSSGVPLAKLLPRIAQMGPLLLEEP 727
S EFGN+ME SL VD LM ++ L G + +SG+PLA+L+PR+AQMG LLLE+P
Sbjct: 288 SVEFGNIMERSLEVGVDGLMEEMEASLAGGSSKASGIPLARLVPRVAQMGLLLLEDP 344
Score = 61.2 bits (147), Expect(3) = 4e-34
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +3
Query: 288 QETVLQILKTFMNVGDLHHWMTYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIG 467
+ET QI+K FM+ HHW+ Y++P D QS I + S+DD +V P NK DQL+
Sbjct: 225 RETTTQIIKIFMSTASPHHWLDYVMPGD----NQSSITDTLSTDDDAVAPNFNKFDQLMM 280
Query: 468 EARAVL 485
E RAVL
Sbjct: 281 ETRAVL 286
>ref|XP_002317886.1| predicted protein [Populus trichocarpa] gi|222858559|gb|EEE96106.1|
predicted protein [Populus trichocarpa]
Length = 374
Score = 64.7 bits (156), Expect(3) = 1e-31
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +1
Query: 1 TARGMGASYLLEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAATEVLKGKQL 180
TARG+G+S LLE VD DR QQ FLA AD+L+ G++ LI N+Q TEV++GK+L
Sbjct: 159 TARGLGSSLLLENVDLIDRD---DQQNFLAGADFLANNGLLALISNIQAVVTEVIEGKKL 215
Query: 181 RDLF 192
DLF
Sbjct: 216 IDLF 219
Score = 62.0 bits (149), Expect(3) = 1e-31
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = +3
Query: 291 ETVLQILKTFMNVGDLHHWMTYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGE 470
ETV+QIL FM+VG LH W+ YL+PED+ Y+ + S S DDT V P DQL+ E
Sbjct: 226 ETVMQILDKFMSVGSLHQWIDYLMPEDSGHYK---LGTSSSIDDT-VLPNSTNFDQLMVE 281
Query: 471 ARAVL 485
AR VL
Sbjct: 282 ARTVL 286
Score = 56.6 bits (135), Expect(3) = 1e-31
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Frame = +2
Query: 563 SAEFGNVMEVSLRSVVDALMNDVGLQ---SGGNPSSGVPLAKLLPRIAQMGPLLLEEPS 730
SAEFG +M +SL+ VDAL+ D+ Q +G + +SG+PLAKLL R+ QM P LL E S
Sbjct: 288 SAEFGKIMGISLKVAVDALVEDMEAQCQSTGASLTSGMPLAKLLSRVMQMVPSLLREAS 346
>ref|XP_002529562.1| amino acid transporter, putative [Ricinus communis]
gi|223530974|gb|EEF32831.1| amino acid transporter,
putative [Ricinus communis]
Length = 373
Score = 67.8 bits (164), Expect(3) = 3e-31
Identities = 36/57 (63%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +2
Query: 563 SAEFGNVMEVSLRSVVDALMNDVGLQS-GGNPSSGVPLAKLLPRIAQMGPLLLEEPS 730
SAEF V+E SL VDAL+ D+G +S GG+ +G+PLA+L+PR+AQMGPLLLEEPS
Sbjct: 288 SAEFLGVVEKSLEVSVDALVADMGAESSGGSLMAGMPLARLVPRVAQMGPLLLEEPS 344
Score = 62.8 bits (151), Expect(3) = 3e-31
Identities = 32/64 (50%), Positives = 47/64 (73%)
Frame = +1
Query: 1 TARGMGASYLLEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAATEVLKGKQL 180
TAR +G+S L+E++D +R GQ Q FLA++D+ + G++ L ++Q+AA EVLKGKQL
Sbjct: 159 TARVLGSSDLIEDIDLIERDGQ---QKFLASSDFFANSGILALSSDVQLAAAEVLKGKQL 215
Query: 181 RDLF 192
RD F
Sbjct: 216 RDFF 219
Score = 51.2 bits (121), Expect(3) = 3e-31
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +3
Query: 291 ETVLQILKTFMNVGDLHHWMTYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGE 470
ET++QIL M+ G HHW+ YL+P DA ++ + SSDD + G K +QL+ E
Sbjct: 226 ETIMQILDLLMSRGSPHHWVEYLMPADARFDKRPI---DSSSDDIIMTDG-TKFEQLMAE 281
Query: 471 ARAVL 485
ARAV+
Sbjct: 282 ARAVI 286