BLASTX nr result

ID: Coptis23_contig00022238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022238
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267052.1| PREDICTED: glutaredoxin-C5, chloroplastic-li...   120   2e-25
emb|CBI37229.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|NP_194602.2| glutaredoxin-C5 [Arabidopsis thaliana] gi|75151...   115   5e-24
pdb|3RHB|A Chain A, Crystal Structure Of The Apo Form Of Glutare...   115   5e-24
gb|ACF74281.1| electron transporter/thiol-disulfide exchange int...   115   5e-24

>ref|XP_002267052.1| PREDICTED: glutaredoxin-C5, chloroplastic-like [Vitis vinifera]
          Length = 178

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/66 (84%), Positives = 62/66 (93%)
 Frame = +3

Query: 408 LEENVKKTLSDNHVVIYSKTWCSYSSEVKSLFKRLGVQPHVVELDQMGPQGPQLQKVLER 587
           LEE VKKT+ +N VV+YSKTWCSYSSEVKSLFKRLGV+P V+ELD+MGPQGPQLQKVLER
Sbjct: 73  LEETVKKTVDENPVVVYSKTWCSYSSEVKSLFKRLGVEPFVIELDEMGPQGPQLQKVLER 132

Query: 588 LTGQHT 605
           LTGQHT
Sbjct: 133 LTGQHT 138


>emb|CBI37229.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/66 (84%), Positives = 62/66 (93%)
 Frame = +3

Query: 408 LEENVKKTLSDNHVVIYSKTWCSYSSEVKSLFKRLGVQPHVVELDQMGPQGPQLQKVLER 587
           LEE VKKT+ +N VV+YSKTWCSYSSEVKSLFKRLGV+P V+ELD+MGPQGPQLQKVLER
Sbjct: 9   LEETVKKTVDENPVVVYSKTWCSYSSEVKSLFKRLGVEPFVIELDEMGPQGPQLQKVLER 68

Query: 588 LTGQHT 605
           LTGQHT
Sbjct: 69  LTGQHT 74


>ref|NP_194602.2| glutaredoxin-C5 [Arabidopsis thaliana]
           gi|75151040|sp|Q8GWS0.1|GRXC5_ARATH RecName:
           Full=Glutaredoxin-C5, chloroplastic; Short=AtGrxC5;
           Flags: Precursor gi|26452363|dbj|BAC43267.1| unknown
           protein [Arabidopsis thaliana]
           gi|28372898|gb|AAO39931.1| At4g28730 [Arabidopsis
           thaliana] gi|332660135|gb|AEE85535.1| glutaredoxin-C5
           [Arabidopsis thaliana]
          Length = 174

 Score =  115 bits (289), Expect = 5e-24
 Identities = 53/66 (80%), Positives = 63/66 (95%)
 Frame = +3

Query: 408 LEENVKKTLSDNHVVIYSKTWCSYSSEVKSLFKRLGVQPHVVELDQMGPQGPQLQKVLER 587
           +EE+++KT+++N VVIYSKTWCSY +EVK+LFKRLGVQP VVELDQ+GPQGPQLQKVLER
Sbjct: 69  MEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLER 128

Query: 588 LTGQHT 605
           LTGQHT
Sbjct: 129 LTGQHT 134


>pdb|3RHB|A Chain A, Crystal Structure Of The Apo Form Of Glutaredoxin C5 From
           Arabidopsis Thaliana gi|334359526|pdb|3RHC|A Chain A,
           Crystal Structure Of The Holo Form Of Glutaredoxin C5
           From Arabidopsis Thaliana gi|334359527|pdb|3RHC|B Chain
           B, Crystal Structure Of The Holo Form Of Glutaredoxin C5
           From Arabidopsis Thaliana
          Length = 113

 Score =  115 bits (289), Expect = 5e-24
 Identities = 53/66 (80%), Positives = 63/66 (95%)
 Frame = +3

Query: 408 LEENVKKTLSDNHVVIYSKTWCSYSSEVKSLFKRLGVQPHVVELDQMGPQGPQLQKVLER 587
           +EE+++KT+++N VVIYSKTWCSY +EVK+LFKRLGVQP VVELDQ+GPQGPQLQKVLER
Sbjct: 8   MEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLER 67

Query: 588 LTGQHT 605
           LTGQHT
Sbjct: 68  LTGQHT 73


>gb|ACF74281.1| electron transporter/thiol-disulfide exchange intermediate protein
           [Arachis hypogaea]
          Length = 187

 Score =  115 bits (289), Expect = 5e-24
 Identities = 54/66 (81%), Positives = 61/66 (92%)
 Frame = +3

Query: 408 LEENVKKTLSDNHVVIYSKTWCSYSSEVKSLFKRLGVQPHVVELDQMGPQGPQLQKVLER 587
           LEE +KKT+S N VV+YSKTWCSYSSEVK+LFK+LGV+P V ELD+MGPQGPQLQKVLER
Sbjct: 83  LEETIKKTVSGNPVVVYSKTWCSYSSEVKALFKKLGVEPLVFELDEMGPQGPQLQKVLER 142

Query: 588 LTGQHT 605
           LTGQHT
Sbjct: 143 LTGQHT 148


Top