BLASTX nr result

ID: Coptis23_contig00022234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022234
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|2235...   211   6e-53
ref|XP_002322961.1| laccase 1a [Populus trichocarpa] gi|22286759...   207   9e-52
ref|XP_002314124.1| predicted protein [Populus trichocarpa] gi|2...   206   1e-51
gb|AAC49538.1| diphenol oxidase, partial [Nicotiana tabacum]          206   2e-51
ref|XP_002308209.1| laccase 1d [Populus trichocarpa] gi|22285418...   206   2e-51

>ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|223540267|gb|EEF41838.1|
           laccase, putative [Ricinus communis]
          Length = 556

 Score =  211 bits (536), Expect = 6e-53
 Identities = 105/137 (76%), Positives = 114/137 (83%)
 Frame = -3

Query: 413 ILGEWWKSDVEAVINEALKSGFVPNVSDTHTINSHPGPLSTCXXXXXXKDGFTLKVKRGK 234
           +L EWWKSDVEAVINEALKSG  PNVSD HTIN HPGP+  C        GFTL V  GK
Sbjct: 162 VLSEWWKSDVEAVINEALKSGLAPNVSDAHTINGHPGPVPACPSQG----GFTLPVHSGK 217

Query: 233 TYMLRIINAALNEELFFKIAKHRLTVVEVDATYVKPFKTNTMVIAPGQTTNVLLTADRST 54
           TYMLRI+NAALNEELFFKIA H+LTVVEVDATYVKPFKT+T+VIAPGQTTNVLLTA RS+
Sbjct: 218 TYMLRIVNAALNEELFFKIAGHQLTVVEVDATYVKPFKTDTIVIAPGQTTNVLLTAGRSS 277

Query: 53  GNYLVSVSPFMDSPIEV 3
           G YLV+ SPFMD+PI V
Sbjct: 278 GKYLVAASPFMDAPIAV 294


>ref|XP_002322961.1| laccase 1a [Populus trichocarpa] gi|222867591|gb|EEF04722.1|
           laccase 1a [Populus trichocarpa]
          Length = 557

 Score =  207 bits (526), Expect = 9e-52
 Identities = 101/137 (73%), Positives = 115/137 (83%)
 Frame = -3

Query: 413 ILGEWWKSDVEAVINEALKSGFVPNVSDTHTINSHPGPLSTCXXXXXXKDGFTLKVKRGK 234
           +L EWWKSD EAVINEALKSG  PNVSD HTIN HPG +STC        GFTL V+ GK
Sbjct: 161 VLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSTCSSQG----GFTLPVQSGK 216

Query: 233 TYMLRIINAALNEELFFKIAKHRLTVVEVDATYVKPFKTNTMVIAPGQTTNVLLTADRST 54
           TYMLR+INAALNEELFFKIA H+LTVVEVDATYVKPFKT+T++IAPGQTTNVL+T +++T
Sbjct: 217 TYMLRLINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNT 276

Query: 53  GNYLVSVSPFMDSPIEV 3
           G YLV+ SPFMD+PI V
Sbjct: 277 GKYLVAASPFMDAPIAV 293


>ref|XP_002314124.1| predicted protein [Populus trichocarpa] gi|222850532|gb|EEE88079.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  206 bits (525), Expect = 1e-51
 Identities = 103/137 (75%), Positives = 113/137 (82%)
 Frame = -3

Query: 413 ILGEWWKSDVEAVINEALKSGFVPNVSDTHTINSHPGPLSTCXXXXXXKDGFTLKVKRGK 234
           ILGEWWKSDVEAVINEA KSG  PNVSD HTIN HPGP+S C        G+ L V  GK
Sbjct: 162 ILGEWWKSDVEAVINEATKSGIAPNVSDAHTINGHPGPVSACSSHG----GYNLSVHPGK 217

Query: 233 TYMLRIINAALNEELFFKIAKHRLTVVEVDATYVKPFKTNTMVIAPGQTTNVLLTADRST 54
           TYMLRIINAALNEELFFKIA H+LTVVEVDATYVKPFK +T+VIAPGQTTNVL+TA+R +
Sbjct: 218 TYMLRIINAALNEELFFKIAGHQLTVVEVDATYVKPFKIDTVVIAPGQTTNVLVTANRGS 277

Query: 53  GNYLVSVSPFMDSPIEV 3
           G YLV+ SPFMD+PI V
Sbjct: 278 GQYLVAASPFMDAPIAV 294


>gb|AAC49538.1| diphenol oxidase, partial [Nicotiana tabacum]
          Length = 409

 Score =  206 bits (524), Expect = 2e-51
 Identities = 99/137 (72%), Positives = 115/137 (83%)
 Frame = -3

Query: 413 ILGEWWKSDVEAVINEALKSGFVPNVSDTHTINSHPGPLSTCXXXXXXKDGFTLKVKRGK 234
           +L EWWKSD EAVINEALKSG  PNVSD HTIN HPGP+S C        G++L V+ GK
Sbjct: 13  VLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGPVSNCPTQG----GYSLSVEPGK 68

Query: 233 TYMLRIINAALNEELFFKIAKHRLTVVEVDATYVKPFKTNTMVIAPGQTTNVLLTADRST 54
           TYMLR+INAALNEELFFKIA H++TVVEVDATYVKPFKT+T+VIAPGQTTNV++TAD+S 
Sbjct: 69  TYMLRVINAALNEELFFKIAGHKMTVVEVDATYVKPFKTDTIVIAPGQTTNVIVTADQSF 128

Query: 53  GNYLVSVSPFMDSPIEV 3
           G Y+V+ SPFMD+PI V
Sbjct: 129 GKYMVAASPFMDAPIAV 145


>ref|XP_002308209.1| laccase 1d [Populus trichocarpa] gi|222854185|gb|EEE91732.1|
           laccase 1d [Populus trichocarpa]
          Length = 550

 Score =  206 bits (524), Expect = 2e-51
 Identities = 101/137 (73%), Positives = 114/137 (83%)
 Frame = -3

Query: 413 ILGEWWKSDVEAVINEALKSGFVPNVSDTHTINSHPGPLSTCXXXXXXKDGFTLKVKRGK 234
           +L EWWKSD EAVINEALKSG  PNVSD HTIN HPG +S C        GFTL VK G+
Sbjct: 154 VLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSACSSQG----GFTLPVKSGE 209

Query: 233 TYMLRIINAALNEELFFKIAKHRLTVVEVDATYVKPFKTNTMVIAPGQTTNVLLTADRST 54
           TYMLR+INAALNEELFFKIA H+LTVVEVDATYVKPFKT+T++IAPGQTTNVL+T +++T
Sbjct: 210 TYMLRLINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNT 269

Query: 53  GNYLVSVSPFMDSPIEV 3
           G YLV+ SPFMDSPI V
Sbjct: 270 GKYLVAASPFMDSPIAV 286


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