BLASTX nr result

ID: Coptis23_contig00022228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022228
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37893.3| unnamed protein product [Vitis vinifera]              334   8e-90
ref|XP_002277675.1| PREDICTED: probable endo-1,4-beta-xylanase C...   334   8e-90
ref|XP_002534153.1| Endo-1,4-beta-xylanase A precursor, putative...   330   8e-89
ref|XP_002306176.1| predicted protein [Populus trichocarpa] gi|2...   325   4e-87
ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C...   323   1e-86

>emb|CBI37893.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  334 bits (856), Expect = 8e-90
 Identities = 155/196 (79%), Positives = 178/196 (90%)
 Frame = +2

Query: 2   FIRANQIAVRGHNIFWEDPIYAPPWVRNLTGDELKIAVSLRIQSLMSKYKEEFIHWDVSN 181
           F+RANQI  RGHNIFWEDP Y P WVRNL+G  L+ AV+ RIQSLMSKYK+EF+HWDVSN
Sbjct: 340 FVRANQIVARGHNIFWEDPKYTPAWVRNLSGPALQSAVNNRIQSLMSKYKDEFVHWDVSN 399

Query: 182 EMLHFDFYEQKLGPNATLDFFKTAHQSDPLATLFMNEFNVVETCTDVNSTVDSYILRVKE 361
           EMLHFDFYEQ+LGP+ATL F++TAH+SDPLATLFMN+FNVVETC+DVNSTVD+YI R++E
Sbjct: 400 EMLHFDFYEQRLGPDATLHFYETAHESDPLATLFMNDFNVVETCSDVNSTVDAYISRLRE 459

Query: 362 LKRGGATMDGIGLEGHFAVPNLPLMRAVIDKLATLGLPIWLTEIDISKTIDKQTQAIYLE 541
           L RGGATM GIGLEGHF +PN PL+RA++DKLATL LPIWLTEIDIS T+ K+TQA+YLE
Sbjct: 460 LSRGGATMSGIGLEGHFTIPNPPLIRAILDKLATLQLPIWLTEIDISNTLSKETQAVYLE 519

Query: 542 QVLREGFSHPSVNGIM 589
           QVLREGFSHPSVNGIM
Sbjct: 520 QVLREGFSHPSVNGIM 535


>ref|XP_002277675.1| PREDICTED: probable endo-1,4-beta-xylanase C-like [Vitis vinifera]
          Length = 549

 Score =  334 bits (856), Expect = 8e-90
 Identities = 155/196 (79%), Positives = 178/196 (90%)
 Frame = +2

Query: 2   FIRANQIAVRGHNIFWEDPIYAPPWVRNLTGDELKIAVSLRIQSLMSKYKEEFIHWDVSN 181
           F+RANQI  RGHNIFWEDP Y P WVRNL+G  L+ AV+ RIQSLMSKYK+EF+HWDVSN
Sbjct: 264 FVRANQIVARGHNIFWEDPKYTPAWVRNLSGPALQSAVNNRIQSLMSKYKDEFVHWDVSN 323

Query: 182 EMLHFDFYEQKLGPNATLDFFKTAHQSDPLATLFMNEFNVVETCTDVNSTVDSYILRVKE 361
           EMLHFDFYEQ+LGP+ATL F++TAH+SDPLATLFMN+FNVVETC+DVNSTVD+YI R++E
Sbjct: 324 EMLHFDFYEQRLGPDATLHFYETAHESDPLATLFMNDFNVVETCSDVNSTVDAYISRLRE 383

Query: 362 LKRGGATMDGIGLEGHFAVPNLPLMRAVIDKLATLGLPIWLTEIDISKTIDKQTQAIYLE 541
           L RGGATM GIGLEGHF +PN PL+RA++DKLATL LPIWLTEIDIS T+ K+TQA+YLE
Sbjct: 384 LSRGGATMSGIGLEGHFTIPNPPLIRAILDKLATLQLPIWLTEIDISNTLSKETQAVYLE 443

Query: 542 QVLREGFSHPSVNGIM 589
           QVLREGFSHPSVNGIM
Sbjct: 444 QVLREGFSHPSVNGIM 459


>ref|XP_002534153.1| Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis]
           gi|223525780|gb|EEF28229.1| Endo-1,4-beta-xylanase A
           precursor, putative [Ricinus communis]
          Length = 473

 Score =  330 bits (847), Expect = 8e-89
 Identities = 155/195 (79%), Positives = 176/195 (90%)
 Frame = +2

Query: 5   IRANQIAVRGHNIFWEDPIYAPPWVRNLTGDELKIAVSLRIQSLMSKYKEEFIHWDVSNE 184
           +RANQI  RGHNIFWEDP Y P WV+NL+GD LK AV+ RIQSLMSKYKEEFIHWDVSNE
Sbjct: 189 LRANQITGRGHNIFWEDPKYTPKWVQNLSGDALKSAVNSRIQSLMSKYKEEFIHWDVSNE 248

Query: 185 MLHFDFYEQKLGPNATLDFFKTAHQSDPLATLFMNEFNVVETCTDVNSTVDSYILRVKEL 364
           MLHFDFYEQ+LGP+ATL F++TAHQ+DPLATLFMNEFNVVETC+DVNSTVD+YI R++EL
Sbjct: 249 MLHFDFYEQRLGPDATLHFYETAHQADPLATLFMNEFNVVETCSDVNSTVDTYISRLREL 308

Query: 365 KRGGATMDGIGLEGHFAVPNLPLMRAVIDKLATLGLPIWLTEIDISKTIDKQTQAIYLEQ 544
           + GG  MDGIGLE HF+VPNLPLMR ++DKLATLGLPIWLTE+DISK  D ++Q IYLEQ
Sbjct: 309 EGGGVFMDGIGLESHFSVPNLPLMRGILDKLATLGLPIWLTEVDISKNFDHKSQGIYLEQ 368

Query: 545 VLREGFSHPSVNGIM 589
           VLREGFSHP+VNGIM
Sbjct: 369 VLREGFSHPAVNGIM 383


>ref|XP_002306176.1| predicted protein [Populus trichocarpa] gi|222849140|gb|EEE86687.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  325 bits (833), Expect = 4e-87
 Identities = 150/196 (76%), Positives = 179/196 (91%)
 Frame = +2

Query: 2   FIRANQIAVRGHNIFWEDPIYAPPWVRNLTGDELKIAVSLRIQSLMSKYKEEFIHWDVSN 181
           F+ ANQI  RGHNIFWEDP Y P WVR+LTG +LK AV+ RIQSLMSKYKEEFIHWDVSN
Sbjct: 4   FVLANQIVARGHNIFWEDPKYNPAWVRDLTGPDLKSAVNFRIQSLMSKYKEEFIHWDVSN 63

Query: 182 EMLHFDFYEQKLGPNATLDFFKTAHQSDPLATLFMNEFNVVETCTDVNSTVDSYILRVKE 361
           EMLHFDFYE++LGP+ATL F+KTAH++DPLA+LF+NEFNVVETCTDV++TVD+YI +++E
Sbjct: 64  EMLHFDFYEERLGPDATLHFYKTAHEADPLASLFLNEFNVVETCTDVSTTVDTYIDKIRE 123

Query: 362 LKRGGATMDGIGLEGHFAVPNLPLMRAVIDKLATLGLPIWLTEIDISKTIDKQTQAIYLE 541
           L+RGG++M+GIGLE HF+ PNLPLMRA++DKLATL LPIWLTE+DIS   DK+TQAIYLE
Sbjct: 124 LERGGSSMNGIGLESHFSKPNLPLMRAILDKLATLKLPIWLTEVDISNKFDKETQAIYLE 183

Query: 542 QVLREGFSHPSVNGIM 589
           QVLREGFSHP+V+GIM
Sbjct: 184 QVLREGFSHPAVDGIM 199


>ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C-like [Glycine max]
          Length = 547

 Score =  323 bits (829), Expect = 1e-86
 Identities = 149/196 (76%), Positives = 173/196 (88%)
 Frame = +2

Query: 2   FIRANQIAVRGHNIFWEDPIYAPPWVRNLTGDELKIAVSLRIQSLMSKYKEEFIHWDVSN 181
           F+R N I  RGHNIFWEDP Y PPWV NLTG +L+ AV+ RI SLMS+YK+EF+HWDVSN
Sbjct: 262 FVRTNNIIARGHNIFWEDPKYTPPWVLNLTGTQLQSAVNSRIHSLMSQYKDEFVHWDVSN 321

Query: 182 EMLHFDFYEQKLGPNATLDFFKTAHQSDPLATLFMNEFNVVETCTDVNSTVDSYILRVKE 361
           EMLHFDFYE++LGPNATL FF+TAH+SDPLATLFMN+FNVVETC+DV STVD+YI RV+E
Sbjct: 322 EMLHFDFYEERLGPNATLHFFQTAHKSDPLATLFMNDFNVVETCSDVKSTVDAYISRVRE 381

Query: 362 LKRGGATMDGIGLEGHFAVPNLPLMRAVIDKLATLGLPIWLTEIDISKTIDKQTQAIYLE 541
           L+R G  MDGIGLEGHF +PN PL+RA++DKLATLGLPIWLTE+DISKT+D+  QA Y E
Sbjct: 382 LQRNGIFMDGIGLEGHFTIPNPPLIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYSE 441

Query: 542 QVLREGFSHPSVNGIM 589
           +VLREGFSHPSVNGIM
Sbjct: 442 EVLREGFSHPSVNGIM 457


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