BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022215
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    77   1e-12
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...    62   4e-08
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...    60   1e-07
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...    57   1e-06

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
 Frame = +1

Query: 1    DSLASGSTLLAPS---LPSSMARPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPG 171
            ++ AS S  LAP    LP + A  SG PWIE   NLP LN+NM    S SSF+  +KK  
Sbjct: 2173 ENFASSSVPLAPPFPLLPQNTAGASGLPWIEPNLNLPPLNINMMNPSSSSSFLKPQKK-S 2231

Query: 172  IQMSPSPEVLQLVASFAGPGPH 237
              +SPSPEVLQLVAS   PGPH
Sbjct: 2232 TGLSPSPEVLQLVASCVAPGPH 2253


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +1

Query: 16   GSTLLAPSLPSSMA-RPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPGIQMSPSP 192
            G  + + S+P  +    SG PW E+  NLP  +L+   S + S+++N +KK  + +SPSP
Sbjct: 2158 GCNVASTSIPPPLVPETSGRPWNESDLNLPLPSLSKMNSLTSSAYLNVQKKTTMGLSPSP 2217

Query: 193  EVLQLVASFAGPGPH 237
            EVLQLVAS   PGPH
Sbjct: 2218 EVLQLVASCVAPGPH 2232


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = +1

Query: 34   PSLPSSMARPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVA 213
            P +P  +   SG PW E+  NLP  +L+   S + S+++N +KK  + +SPSPEVLQLVA
Sbjct: 2168 PQVPPLVHETSG-PWNESDFNLPLPSLHKMNSLTSSAYLNIQKKTTMGLSPSPEVLQLVA 2226

Query: 214  SFAGPGPH 237
            S   PGPH
Sbjct: 2227 SCVAPGPH 2234


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/80 (48%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1    DSLASGSTLLAPSLPS-SMARPSGFPWIEAPKNLPSLNLNMTTSQSLSSFVNHRKKPGIQ 177
            D+ AS S  L PSLP  S     G   IE+  NLP LNL + +S   S      KK    
Sbjct: 2156 DNGASSSLPLGPSLPLLSHTGALGTQQIESDLNLPPLNLKVASSSHSS------KKASSG 2209

Query: 178  MSPSPEVLQLVASFAGPGPH 237
            +SPSPEVLQLVAS   PGPH
Sbjct: 2210 LSPSPEVLQLVASCVAPGPH 2229