BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022201
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   103   1e-20
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...    99   3e-19
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...    97   1e-18
ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [S...    97   1e-18

>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539891|gb|EEF41470.1| Photosystem II
           stability/assembly factor HCF136, chloroplast precursor,
           putative [Ricinus communis]
          Length = 397

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = +1

Query: 1   SGILLRTTNGGKTWSRDKAADDIAANLYSVKFINDSKGFVLGNDGVLLRYLG 156
           SGILLRTTNGGKTW+RDKAAD IAANLYSVKFINDSKGFVLGNDGVLLRYLG
Sbjct: 346 SGILLRTTNGGKTWTRDKAADSIAANLYSVKFINDSKGFVLGNDGVLLRYLG 397


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = +1

Query: 1   SGILLRTTNGGKTWSRDKAADDIAANLYSVKFINDSKGFVLGNDGVLLRYLG 156
           SG+LLRTTNGGKTW+RDKAAD+IAANLYSVKFI+D KGFVLGNDGVLLRYLG
Sbjct: 343 SGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 394


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Vitis vinifera]
           gi|297737938|emb|CBI27139.3| unnamed protein product
           [Vitis vinifera]
          Length = 404

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/52 (88%), Positives = 52/52 (100%)
 Frame = +1

Query: 1   SGILLRTTNGGKTWSRDKAADDIAANLYSVKFINDSKGFVLGNDGVLLRYLG 156
           SG+LLRTTNGGKTW+RDKAAD+IAANLYSVKFI+D+KGFVLGNDGVLLR+LG
Sbjct: 353 SGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic-like [Cucumis sativus]
           gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
           II stability/assembly factor HCF136, chloroplastic-like
           [Cucumis sativus]
          Length = 406

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/52 (84%), Positives = 51/52 (98%)
 Frame = +1

Query: 1   SGILLRTTNGGKTWSRDKAADDIAANLYSVKFINDSKGFVLGNDGVLLRYLG 156
           SG+LL+TTNGG++W+RDKAAD+IAANLYSVKFIND KGFVLGNDGVLL+YLG
Sbjct: 355 SGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_002439075.1| hypothetical protein SORBIDRAFT_10g031120 [Sorghum bicolor]
           gi|241917298|gb|EER90442.1| hypothetical protein
           SORBIDRAFT_10g031120 [Sorghum bicolor]
          Length = 397

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/52 (86%), Positives = 50/52 (96%)
 Frame = +1

Query: 1   SGILLRTTNGGKTWSRDKAADDIAANLYSVKFINDSKGFVLGNDGVLLRYLG 156
           SG+LL+TTNGGK W RDKAAD+IAANLYSVKF++DSKGFVLGNDGVLLRYLG
Sbjct: 346 SGVLLKTTNGGKNWVRDKAADNIAANLYSVKFLDDSKGFVLGNDGVLLRYLG 397