BLASTX nr result

ID: Coptis23_contig00022199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022199
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16825.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002282147.1| PREDICTED: myosin heavy chain kinase B-like ...    69   4e-10
ref|XP_004170959.1| PREDICTED: LOW QUALITY PROTEIN: cell divisio...    67   2e-09
ref|XP_004135285.1| PREDICTED: cell division control protein 4-l...    67   2e-09
ref|XP_002511281.1| F-box and wd40 domain protein, putative [Ric...    65   6e-09

>emb|CBI16825.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
 Frame = +3

Query: 3   SSSRYFCLNVMEGHEKPVKSLVAVSQEE----GGFSVCSGSLDGEIKVWRVSFSN 155
           S  RY CL+V+EGHEKPVK+LVAVS  E    G   V SGSLDGEIKVW+VS S+
Sbjct: 417 SDGRYCCLSVLEGHEKPVKALVAVSDGESKVAGAIRVFSGSLDGEIKVWQVSVSS 471


>ref|XP_002282147.1| PREDICTED: myosin heavy chain kinase B-like [Vitis vinifera]
          Length = 432

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
 Frame = +3

Query: 3   SSSRYFCLNVMEGHEKPVKSLVAVSQEE----GGFSVCSGSLDGEIKVWRVSFSN 155
           S  RY CL+V+EGHEKPVK+LVAVS  E    G   V SGSLDGEIKVW+VS S+
Sbjct: 369 SDGRYCCLSVLEGHEKPVKALVAVSDGESKVAGAIRVFSGSLDGEIKVWQVSVSS 423


>ref|XP_004170959.1| PREDICTED: LOW QUALITY PROTEIN: cell division control protein
           4-like, partial [Cucumis sativus]
          Length = 420

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 6/53 (11%)
 Frame = +3

Query: 15  YFCLNVMEGHEKPVKSLVAVSQEEGGF------SVCSGSLDGEIKVWRVSFSN 155
           + CL V+EGH+KPVKSLV VS+ EG        SVCSGSLDGE+K W++S SN
Sbjct: 354 FSCLTVLEGHKKPVKSLVIVSEAEGMMRNGGVVSVCSGSLDGELKAWKISLSN 406


>ref|XP_004135285.1| PREDICTED: cell division control protein 4-like [Cucumis sativus]
          Length = 445

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 6/53 (11%)
 Frame = +3

Query: 15  YFCLNVMEGHEKPVKSLVAVSQEEGGF------SVCSGSLDGEIKVWRVSFSN 155
           + CL V+EGH+KPVKSLV VS+ EG        SVCSGSLDGE+K W++S SN
Sbjct: 379 FSCLTVLEGHKKPVKSLVIVSEAEGMMRNGGVVSVCSGSLDGELKAWKISLSN 431


>ref|XP_002511281.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223550396|gb|EEF51883.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 351

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = +3

Query: 15  YFCLNVMEGHEKPVKSLVAVSQEEGGFSVCSGSLDGEIKVWRVS 146
           Y C+ V+EGHE+PVKSLVA S      S+CSGSLDGEIKVW +S
Sbjct: 305 YCCMVVLEGHERPVKSLVAASNNGLSLSICSGSLDGEIKVWEIS 348


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