BLASTX nr result

ID: Coptis23_contig00022189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022189
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881559.1| hypothetical protein ARALYDRAFT_321506 [Arab...    74   2e-25
ref|NP_565879.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] gi|1...    74   2e-25
ref|NP_001078020.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] g...    74   2e-25
ref|XP_002306748.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-24
ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associat...    69   2e-24

>ref|XP_002881559.1| hypothetical protein ARALYDRAFT_321506 [Arabidopsis lyrata subsp.
           lyrata] gi|297327398|gb|EFH57818.1| hypothetical protein
           ARALYDRAFT_321506 [Arabidopsis lyrata subsp. lyrata]
          Length = 858

 Score = 73.6 bits (179), Expect(2) = 2e-25
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = +3

Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449
           GPIA+IRD++KI+ L  +S LR L I+NSAG+LLS T W  PGGRL+GM+W
Sbjct: 45  GPIAVIRDDSKIVQLYAESALRKLRIFNSAGILLSETVWKHPGGRLIGMSW 95



 Score = 67.4 bits (163), Expect(2) = 2e-25
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +1

Query: 58  SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACAS 177
           +VSVAAEWQLL++RYY KPEIY M+W ++DL+ NK+ACAS
Sbjct: 3   NVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACAS 42


>ref|NP_565879.1| vacuoleless1 (VCL1) [Arabidopsis thaliana]
           gi|13877133|gb|AAK43713.1|AF359240_1 VCL1 [Arabidopsis
           thaliana] gi|15081711|gb|AAK82510.1| At2g38020/T8P21.7
           [Arabidopsis thaliana] gi|22655028|gb|AAM98105.1|
           At2g38020/T8P21.7 [Arabidopsis thaliana]
           gi|330254385|gb|AEC09479.1| vacuoleless1 (VCL1)
           [Arabidopsis thaliana]
          Length = 858

 Score = 73.6 bits (179), Expect(2) = 2e-25
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = +3

Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449
           GPIA+IRD++KI+ L  +S LR L I+NSAG+LLS T W  PGGRL+GM+W
Sbjct: 45  GPIAVIRDDSKIVQLYAESALRKLRIFNSAGILLSETVWKHPGGRLIGMSW 95



 Score = 67.4 bits (163), Expect(2) = 2e-25
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +1

Query: 58  SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACAS 177
           +VSVAAEWQLL++RYY KPEIY M+W ++DL+ NK+ACAS
Sbjct: 3   NVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACAS 42


>ref|NP_001078020.1| vacuoleless1 (VCL1) [Arabidopsis thaliana]
           gi|330254386|gb|AEC09480.1| vacuoleless1 (VCL1)
           [Arabidopsis thaliana]
          Length = 834

 Score = 73.6 bits (179), Expect(2) = 2e-25
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = +3

Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449
           GPIA+IRD++KI+ L  +S LR L I+NSAG+LLS T W  PGGRL+GM+W
Sbjct: 45  GPIAVIRDDSKIVQLYAESALRKLRIFNSAGILLSETVWKHPGGRLIGMSW 95



 Score = 67.4 bits (163), Expect(2) = 2e-25
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +1

Query: 58  SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACAS 177
           +VSVAAEWQLL++RYY KPEIY M+W ++DL+ NK+ACAS
Sbjct: 3   NVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACAS 42


>ref|XP_002306748.1| predicted protein [Populus trichocarpa] gi|222856197|gb|EEE93744.1|
           predicted protein [Populus trichocarpa]
          Length = 844

 Score = 72.4 bits (176), Expect(2) = 2e-24
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = +3

Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449
           GPIAIIRD++KI+ L  +S LR L I+NSAG+L S T W  PGGRL+GM+W
Sbjct: 45  GPIAIIRDDSKIVQLYAESALRKLRIFNSAGILFSETVWKHPGGRLIGMSW 95



 Score = 65.1 bits (157), Expect(2) = 2e-24
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +1

Query: 58  SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACA 174
           +VSVAAEWQLL NRYY KPE+Y M+W +IDL+ NK+ACA
Sbjct: 3   NVSVAAEWQLLINRYYRKPELYPMRWKHIDLSRNKVACA 41


>ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Cucumis sativus] gi|449519144|ref|XP_004166595.1|
           PREDICTED: vacuolar protein sorting-associated protein
           16 homolog [Cucumis sativus]
          Length = 844

 Score = 69.3 bits (168), Expect(2) = 2e-24
 Identities = 31/51 (60%), Positives = 39/51 (76%)
 Frame = +3

Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449
           GPIAIIRD++KI+ L  +S LR L I+N AG+ L+ T W  PGGRL+GMAW
Sbjct: 45  GPIAIIRDDSKIVQLYAESALRKLRIFNCAGIQLAETVWRNPGGRLIGMAW 95



 Score = 68.2 bits (165), Expect(2) = 2e-24
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +1

Query: 58  SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACA 174
           +VSVAAEWQLLHNRYY KPE+Y M+W +IDL  NK+ACA
Sbjct: 3   NVSVAAEWQLLHNRYYRKPELYPMRWKHIDLGRNKVACA 41


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