BLASTX nr result
ID: Coptis23_contig00022189
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00022189 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002881559.1| hypothetical protein ARALYDRAFT_321506 [Arab... 74 2e-25 ref|NP_565879.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] gi|1... 74 2e-25 ref|NP_001078020.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] g... 74 2e-25 ref|XP_002306748.1| predicted protein [Populus trichocarpa] gi|2... 72 2e-24 ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associat... 69 2e-24 >ref|XP_002881559.1| hypothetical protein ARALYDRAFT_321506 [Arabidopsis lyrata subsp. lyrata] gi|297327398|gb|EFH57818.1| hypothetical protein ARALYDRAFT_321506 [Arabidopsis lyrata subsp. lyrata] Length = 858 Score = 73.6 bits (179), Expect(2) = 2e-25 Identities = 32/51 (62%), Positives = 41/51 (80%) Frame = +3 Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449 GPIA+IRD++KI+ L +S LR L I+NSAG+LLS T W PGGRL+GM+W Sbjct: 45 GPIAVIRDDSKIVQLYAESALRKLRIFNSAGILLSETVWKHPGGRLIGMSW 95 Score = 67.4 bits (163), Expect(2) = 2e-25 Identities = 28/40 (70%), Positives = 36/40 (90%) Frame = +1 Query: 58 SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACAS 177 +VSVAAEWQLL++RYY KPEIY M+W ++DL+ NK+ACAS Sbjct: 3 NVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACAS 42 >ref|NP_565879.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] gi|13877133|gb|AAK43713.1|AF359240_1 VCL1 [Arabidopsis thaliana] gi|15081711|gb|AAK82510.1| At2g38020/T8P21.7 [Arabidopsis thaliana] gi|22655028|gb|AAM98105.1| At2g38020/T8P21.7 [Arabidopsis thaliana] gi|330254385|gb|AEC09479.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] Length = 858 Score = 73.6 bits (179), Expect(2) = 2e-25 Identities = 32/51 (62%), Positives = 41/51 (80%) Frame = +3 Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449 GPIA+IRD++KI+ L +S LR L I+NSAG+LLS T W PGGRL+GM+W Sbjct: 45 GPIAVIRDDSKIVQLYAESALRKLRIFNSAGILLSETVWKHPGGRLIGMSW 95 Score = 67.4 bits (163), Expect(2) = 2e-25 Identities = 28/40 (70%), Positives = 36/40 (90%) Frame = +1 Query: 58 SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACAS 177 +VSVAAEWQLL++RYY KPEIY M+W ++DL+ NK+ACAS Sbjct: 3 NVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACAS 42 >ref|NP_001078020.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] gi|330254386|gb|AEC09480.1| vacuoleless1 (VCL1) [Arabidopsis thaliana] Length = 834 Score = 73.6 bits (179), Expect(2) = 2e-25 Identities = 32/51 (62%), Positives = 41/51 (80%) Frame = +3 Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449 GPIA+IRD++KI+ L +S LR L I+NSAG+LLS T W PGGRL+GM+W Sbjct: 45 GPIAVIRDDSKIVQLYAESALRKLRIFNSAGILLSETVWKHPGGRLIGMSW 95 Score = 67.4 bits (163), Expect(2) = 2e-25 Identities = 28/40 (70%), Positives = 36/40 (90%) Frame = +1 Query: 58 SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACAS 177 +VSVAAEWQLL++RYY KPEIY M+W ++DL+ NK+ACAS Sbjct: 3 NVSVAAEWQLLYDRYYRKPEIYQMKWKHVDLSRNKVACAS 42 >ref|XP_002306748.1| predicted protein [Populus trichocarpa] gi|222856197|gb|EEE93744.1| predicted protein [Populus trichocarpa] Length = 844 Score = 72.4 bits (176), Expect(2) = 2e-24 Identities = 32/51 (62%), Positives = 40/51 (78%) Frame = +3 Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449 GPIAIIRD++KI+ L +S LR L I+NSAG+L S T W PGGRL+GM+W Sbjct: 45 GPIAIIRDDSKIVQLYAESALRKLRIFNSAGILFSETVWKHPGGRLIGMSW 95 Score = 65.1 bits (157), Expect(2) = 2e-24 Identities = 28/39 (71%), Positives = 34/39 (87%) Frame = +1 Query: 58 SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACA 174 +VSVAAEWQLL NRYY KPE+Y M+W +IDL+ NK+ACA Sbjct: 3 NVSVAAEWQLLINRYYRKPELYPMRWKHIDLSRNKVACA 41 >ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog [Cucumis sativus] gi|449519144|ref|XP_004166595.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog [Cucumis sativus] Length = 844 Score = 69.3 bits (168), Expect(2) = 2e-24 Identities = 31/51 (60%), Positives = 39/51 (76%) Frame = +3 Query: 297 GPIAIIRDEAKIILLRGQSGLRTLNIYNSAGLLLSSTRWDRPGGRLVGMAW 449 GPIAIIRD++KI+ L +S LR L I+N AG+ L+ T W PGGRL+GMAW Sbjct: 45 GPIAIIRDDSKIVQLYAESALRKLRIFNCAGIQLAETVWRNPGGRLIGMAW 95 Score = 68.2 bits (165), Expect(2) = 2e-24 Identities = 29/39 (74%), Positives = 34/39 (87%) Frame = +1 Query: 58 SVSVAAEWQLLHNRYYSKPEIYSMQWTNIDLTHNKLACA 174 +VSVAAEWQLLHNRYY KPE+Y M+W +IDL NK+ACA Sbjct: 3 NVSVAAEWQLLHNRYYRKPELYPMRWKHIDLGRNKVACA 41