BLASTX nr result

ID: Coptis23_contig00022188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022188
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associat...   200   1e-49
gb|ABF69968.1| vacuolar protein sorting 16 (VPS16) family protei...   191   4e-47
ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associat...   181   4e-44
ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associat...   172   3e-41
ref|XP_003532091.1| PREDICTED: vacuolar protein sorting-associat...   169   2e-40

>ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Vitis vinifera] gi|302143532|emb|CBI22093.3| unnamed
           protein product [Vitis vinifera]
          Length = 838

 Score =  200 bits (508), Expect = 1e-49
 Identities = 89/118 (75%), Positives = 107/118 (90%)
 Frame = -1

Query: 359 KECFEQNVVECVFWSNGVVCVSESNQLFCIPDFKNPQACKLADPGLEEFPLCMTVMEPQY 180
           KECFEQNVVECVFW NG+VC++E+NQ+FCI DFKNP  CKLADP L+E+PLC+ V+EPQY
Sbjct: 128 KECFEQNVVECVFWGNGMVCITEANQIFCISDFKNPNPCKLADPNLDEYPLCVAVIEPQY 187

Query: 179 TMSGNVEVLIGVGDYVLVVDEESVQQVGAGVGPLQKMVVTQNGKLIACFTHDGRLLVI 6
           TMSGNVEVL+ V D VL+V+E+ VQQ+GAG+GPLQKMVV++NGKL+A FTHDGRLLVI
Sbjct: 188 TMSGNVEVLLAVDDLVLLVEEDGVQQLGAGIGPLQKMVVSRNGKLLASFTHDGRLLVI 245


>gb|ABF69968.1| vacuolar protein sorting 16 (VPS16) family protein [Musa acuminata]
          Length = 280

 Score =  191 bits (486), Expect = 4e-47
 Identities = 82/118 (69%), Positives = 104/118 (88%)
 Frame = -1

Query: 359 KECFEQNVVECVFWSNGVVCVSESNQLFCIPDFKNPQACKLADPGLEEFPLCMTVMEPQY 180
           KECFEQ VV+CVFW NG+VC++E   +FC+PDFKNP  C+L+DPG++E+PLC+ V++PQY
Sbjct: 128 KECFEQGVVDCVFWGNGMVCITEGFLIFCVPDFKNPVPCRLSDPGIDEYPLCVAVIDPQY 187

Query: 179 TMSGNVEVLIGVGDYVLVVDEESVQQVGAGVGPLQKMVVTQNGKLIACFTHDGRLLVI 6
           TMSGNVEVL+GVGD+VL+V+E+ VQQ+G GVGP QKM V+QNGK +A FTHDGRLLVI
Sbjct: 188 TMSGNVEVLLGVGDHVLLVEEDGVQQLGVGVGPFQKMAVSQNGKYLATFTHDGRLLVI 245


>ref|XP_004144632.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Cucumis sativus] gi|449519144|ref|XP_004166595.1|
           PREDICTED: vacuolar protein sorting-associated protein
           16 homolog [Cucumis sativus]
          Length = 844

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/121 (68%), Positives = 104/121 (85%), Gaps = 3/121 (2%)
 Frame = -1

Query: 359 KECFEQNVVECVFWSNGVVCVSESNQLFCIPDFKNPQACKLADPGLEEFPLCMTVMEPQY 180
           KECFEQNVVECVFW NGVVC++E+NQ+FCI DFKNP ACKL+DPG+E+ P CM V+EPQY
Sbjct: 128 KECFEQNVVECVFWGNGVVCITEANQIFCISDFKNPNACKLSDPGIEDLPHCMVVIEPQY 187

Query: 179 TMSGNVEVLIGVGD-YVLVVDEESVQQVGAGV--GPLQKMVVTQNGKLIACFTHDGRLLV 9
           TMSGNVEVL+GVG+  V+ V+E+ VQ++G G+  GPLQ+M V+ +GK +A FTHDGRLLV
Sbjct: 188 TMSGNVEVLLGVGEACVIAVEEDGVQRLGEGILDGPLQRMAVSLDGKWLAAFTHDGRLLV 247

Query: 8   I 6
           +
Sbjct: 248 L 248


>ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Glycine max]
          Length = 843

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/120 (68%), Positives = 100/120 (83%), Gaps = 3/120 (2%)
 Frame = -1

Query: 359 KECFEQNVVECVFWSNGVVCVSESNQLFCIPDFKNPQACKLADPGLEEFPLCMTVMEPQY 180
           KECFE NV +CVFW NG+VC++E+NQLFCI DF+NP A KLADP +EE P CM V+EPQY
Sbjct: 128 KECFEDNVADCVFWGNGLVCITEANQLFCIADFRNPSAVKLADPEIEEMPHCMAVIEPQY 187

Query: 179 TMSGNVEVLIGVGD-YVLVVDEESVQQVGAGV--GPLQKMVVTQNGKLIACFTHDGRLLV 9
           T+SGNVEVL+GV D  VL V+E+ VQ++G GV  GPLQKMVV+++GK +A FTHDGRLLV
Sbjct: 188 TVSGNVEVLLGVDDAVVLAVEEDGVQRLGEGVLRGPLQKMVVSRDGKWLASFTHDGRLLV 247


>ref|XP_003532091.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Glycine max]
          Length = 843

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/120 (65%), Positives = 100/120 (83%), Gaps = 3/120 (2%)
 Frame = -1

Query: 359 KECFEQNVVECVFWSNGVVCVSESNQLFCIPDFKNPQACKLADPGLEEFPLCMTVMEPQY 180
           KECFE NV +C FW +G+VC++E+NQLFCI DF+NP A KLADPG++E P CM V+EPQY
Sbjct: 128 KECFEDNVADCAFWGHGLVCITEANQLFCIADFRNPSAVKLADPGIDEMPHCMAVIEPQY 187

Query: 179 TMSGNVEVLIGVGD-YVLVVDEESVQQVGAGV--GPLQKMVVTQNGKLIACFTHDGRLLV 9
           T+SGNVEVL+GV D  VL V+E+ VQ++G G+  GPLQKMVV+++GK +A FTHDGRLLV
Sbjct: 188 TVSGNVEVLLGVDDAVVLAVEEDGVQRLGEGLLRGPLQKMVVSRDGKWLASFTHDGRLLV 247


Top