BLASTX nr result

ID: Coptis23_contig00022185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022185
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64557.1| hypothetical protein VITISV_040161 [Vitis vinifera]   114   1e-23
ref|XP_002305438.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22
ref|XP_002313784.1| predicted protein [Populus trichocarpa] gi|2...   108   7e-22
ref|XP_004163006.1| PREDICTED: uncharacterized protein LOC101226...   108   1e-21
emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]   106   4e-21

>emb|CAN64557.1| hypothetical protein VITISV_040161 [Vitis vinifera]
          Length = 273

 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/116 (50%), Positives = 84/116 (72%), Gaps = 2/116 (1%)
 Frame = +1

Query: 259 DNVKAEKAHAMKRYHRLRKIASLFRLLEIVIVLFLFS-WFSTQLPSVIQIITKYLKKLCV 435
           D VK EKA+AM+ YH LRK A+  R+LE+ + LF+   W S ++ + ++I ++YL++LCV
Sbjct: 7   DXVKLEKANAMRXYHTLRKFANFLRVLEVSVALFIMLFWSSKRVSNAVKIFSEYLRELCV 66

Query: 436 LLISPRFVFLIGNAIIITLFVKSGQF-XXXXXXXXXXXXLYEEFVKNSENCQKIVT 600
           +L +PRF+FLIGNAIIITLFVKSG+F             LY+E+V++SEN QK+V+
Sbjct: 67  VLANPRFMFLIGNAIIITLFVKSGRFSGENPDRGNAEPDLYDEYVQHSENSQKVVS 122


>ref|XP_002305438.1| predicted protein [Populus trichocarpa] gi|222848402|gb|EEE85949.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  109 bits (272), Expect = 4e-22
 Identities = 58/110 (52%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
 Frame = +1

Query: 262 NVKAEKAHAMKRYHRLRKIASLFRLLEIVIVLFLFSWFSTQLPSVIQIITKYLKKLCVLL 441
           N+K EKA+A+K++ +++KIASLFRL+EI +VL L S FS QLP  ++  ++Y K L V L
Sbjct: 8   NIKIEKANAIKKHRKIQKIASLFRLIEIGLVLALISRFSIQLPVAVRNSSEYFKDLTVTL 67

Query: 442 ISPRFVFLIGNAIIITLFVKSGQF-XXXXXXXXXXXXLYEEFVKNSENCQ 588
           +SPRFVF++GN I+ITLF KSGQF             LYEEFV+ SE  Q
Sbjct: 68  VSPRFVFVLGNVIVITLFAKSGQFSCQDSNGKNSSTDLYEEFVEKSEKSQ 117


>ref|XP_002313784.1| predicted protein [Populus trichocarpa] gi|222850192|gb|EEE87739.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  108 bits (270), Expect = 7e-22
 Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
 Frame = +1

Query: 262 NVKAEKAHAMKRYHRLRKIASLFRLLEIVIVLFLFSWFSTQLPSVIQIITKYLKKLCVLL 441
           ++K EKA A+K++ ++RKIASLFRL+EI +VL L S FS QLP  ++  ++Y K L V+L
Sbjct: 8   SIKIEKAKAIKKHRKIRKIASLFRLIEIGVVLALISRFSIQLPVAVKNSSEYFKDLTVIL 67

Query: 442 ISPRFVFLIGNAIIITLFVKSGQF-XXXXXXXXXXXXLYEEFVKNSENCQK 591
           +SPRFVF++GN I+ITLF KSGQF             LY+EFV+ SE  Q+
Sbjct: 68  VSPRFVFVLGNMIVITLFAKSGQFSGQDSNGKNPSTDLYDEFVEKSEKSQE 118


>ref|XP_004163006.1| PREDICTED: uncharacterized protein LOC101226152 [Cucumis sativus]
          Length = 228

 Score =  108 bits (269), Expect = 1e-21
 Identities = 58/112 (51%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
 Frame = +1

Query: 262 NVKAEKAHAMKRYHRLRKIASLFRLLEIVIVLFLFSWFSTQLPSVIQIITKYLKKLCVLL 441
           +++ EKA+A+ +Y + RKIA+LFR +E+ ++L + S FS+ LP+ ++  T+Y + L V L
Sbjct: 8   DIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYFRCLSVTL 67

Query: 442 ISPRFVFLIGNAIIITLFVKSGQF-XXXXXXXXXXXXLYEEFVKNSE-NCQK 591
           ISPRFVFLIGNAI+ITLF KSGQF             LYEEF+KNSE N QK
Sbjct: 68  ISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQK 119


>emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]
          Length = 216

 Score =  106 bits (264), Expect = 4e-21
 Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = +1

Query: 259 DNVKAEKAHAMKRYHRLRKIASLFRLLEIVIVLFLFSWFSTQLPSVIQIITKYLKKLCVL 438
           D++K EKA+A+ RY +LRKI +LFR++E+ +VL L S FS QLP  I++  +Y + L V 
Sbjct: 7   DSIKVEKANAILRYRQLRKITNLFRVIEVCLVLILVSKFSFQLPFAIKVSGEYFRDLSVT 66

Query: 439 LISPRFVFLIGNAIIITLFVKSGQF-XXXXXXXXXXXXLYEEFVKNSENCQKIVTTT 606
           LISPRFVF++GNAIII LF KSGQF             LY E V+ SE  +  ++T+
Sbjct: 67  LISPRFVFVVGNAIIIILFAKSGQFSGQNQAEKYDETHLYNEIVEKSEKSRMEISTS 123


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