BLASTX nr result

ID: Coptis23_contig00022184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022184
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27...    88   4e-15
emb|CBI17900.3| unnamed protein product [Vitis vinifera]               86   1e-14
emb|CBI29678.3| unnamed protein product [Vitis vinifera]               81   4e-13
ref|XP_003616893.1| Cc-nbs-lrr resistance protein [Medicago trun...    80   6e-13
emb|CAN74479.1| hypothetical protein VITISV_019238 [Vitis vinifera]    80   8e-13

>ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1063

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 37/274 (13%)
 Frame = +1

Query: 13   ERTNCLFLYHCGDVESVEQVYQSRMSNNLKLLDVQ-----YGKFKFLTSGSVDKAFSNLE 177
            ERT  L+   C  ++++   Y     N LK+L VQ           +T       F +LE
Sbjct: 761  ERTEKLYYIKCRGLDNILMEYDQGSLNGLKILLVQSCHQIVHLMDAVTYIPNRPLFPSLE 820

Query: 178  ELRLNGLSKFEAICDGEVPLQFLQKLRVLNVGFCGNVIT-LLPCDLTVRLQNLEKITVIW 354
            ELR++ L   + IC G++P   L  ++ L V  C  ++  LLP +L  RL++LE + V  
Sbjct: 821  ELRVHNLDYLKEICIGQLPPGSLGNMKFLQVEQCNELVNGLLPANLLRRLESLEVLDVSG 880

Query: 355  CLYLENLFGA-------------------------SIWLSS---PIFPHLRHVEIKRCER 450
              YLE++F                           +IW       IF +L+ + + +C +
Sbjct: 881  S-YLEDIFRTEGLREGEVVVGKLRELKRDNLPELKNIWYGPTQLAIFHNLKILTVIKCRK 939

Query: 451  MKYIFPLGVVRHLLHLEVLDVEYSFNMDTII-THE--DDADKAILPQLKELTLRDLPELS 621
            ++ +F   V + L HLE L +EY   ++ +I  HE  D  ++ I   LK L+L++LP L 
Sbjct: 940  LRILFTYSVAQSLRHLEELWIEYCNGLEGVIGIHEGGDVVERIIFQNLKNLSLQNLPVLR 999

Query: 622  SLCRSGLLVGWPSLVSLRICECGNLKRLPFNTHS 723
            S       +  PSL  L +  C   +      HS
Sbjct: 1000 SFYEGDARIECPSLEQLHVQGCPTFRNYTPYFHS 1033


>emb|CBI17900.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
 Frame = +1

Query: 13   ERTNCLFLYHCGDVESVEQVYQSRMSNNLKLLDVQ-----YGKFKFLTSGSVDKAFSNLE 177
            ERT  L+   C  ++++   Y     N LK+L VQ           +T       F +LE
Sbjct: 761  ERTEKLYYIKCRGLDNILMEYDQGSLNGLKILLVQSCHQIVHLMDAVTYIPNRPLFPSLE 820

Query: 178  ELRLNGLSKFEAICDGEVPLQFLQKLRVLNVGFCGNVIT-LLPCDLTVRLQNLEKITVIW 354
            ELR++ L   + IC G++P   L  ++ L V  C  ++  LLP +L  RL++LE + V  
Sbjct: 821  ELRVHNLDYLKEICIGQLPPGSLGNMKFLQVEQCNELVNGLLPANLLRRLESLEVLDVSG 880

Query: 355  CLYLENLFGA-SIWLSSPIFPHLRHV------EIKRCERMKYIFPLGVVRHLLHLEVLDV 513
              YLE++F    +     +   LR +      E+K   +++ +F   V + L HLE L +
Sbjct: 881  S-YLEDIFRTEGLREGEVVVGKLRELKRDNLPELKNIWKLRILFTYSVAQSLRHLEELWI 939

Query: 514  EYSFNMDTII-THE--DDADKAILPQLKELTLRDLPELSSLCRSGLLVGWPSLVSLRICE 684
            EY   ++ +I  HE  D  ++ I   LK L+L++LP L S       +  PSL  L +  
Sbjct: 940  EYCNGLEGVIGIHEGGDVVERIIFQNLKNLSLQNLPVLRSFYEGDARIECPSLEQLHVQG 999

Query: 685  CGNLKRLPFNTHS 723
            C   +      HS
Sbjct: 1000 CPTFRNYTPYFHS 1012


>emb|CBI29678.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
 Frame = +1

Query: 280  GNVIT--LLPCDLTVRLQNLEKITVIWCLYLENLFGASIWLSSPI----FPHLRHVEIKR 441
            GN IT  +L C   +R+ N+ K+  IW                P+       L  + + +
Sbjct: 791  GNGITKGVLECLEDLRINNVLKLESIW--------------QGPVHAGSLTQLTSLTLVK 836

Query: 442  CERMKYIFPLGVVRHLLHLEVLDVEYSFNMDTIITHEDDA--DKAILPQLKELTLRDLPE 615
            C  +K IF  G+++ L  L+ L VE    ++ II   ++   +   LP+LK L L DLP+
Sbjct: 837  CPELKKIFSNGMIQQLFELQHLRVEECDQIEEIIMESENIGLESCSLPRLKTLVLLDLPK 896

Query: 616  LSSLCRSGLLVGWPSLVSLRICECGNLKRLPFNTHSVPKLKEFVMDRDLFNRLEWEDESV 795
            L S+  S  L  WPSL S++I  C  LKRLPFN  +  KL+     +  +  L WED+++
Sbjct: 897  LKSIWVSDSLE-WPSLQSIKISMCDMLKRLPFNIANAAKLRLIEGQQSWWGALVWEDDAI 955


>ref|XP_003616893.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355518228|gb|AES99851.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1968

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
 Frame = +1

Query: 163  FSNLEELRLNGLSKFEAICDGEVPLQ-FLQKLRVLNVGFCGNVITLLPCDLTVRLQNLEK 339
            F  L  LR+  +    A+ +G++PL    + L  L +  C  +  L    +   L  LEK
Sbjct: 843  FCKLHWLRIEHMKHLGALYNGQMPLSGHFENLEDLYISHCPKLTRLFTLAVAQNLAQLEK 902

Query: 340  ITVIWCLYLENLFG-------ASIWLSSPIFPHLRHVEIKRCERMKYIFPLGVVRHLLHL 498
            + V+ C  L+++         ++      +FP L+   ++ C  ++YI P+ + + L+ L
Sbjct: 903  LQVLSCPELQHILIDDDRDEISAYDYRLLLFPKLKKFHVRECGVLEYIIPITLAQGLVQL 962

Query: 499  EVLDVEYSFNMDTII---THEDDADK-----AILPQLKELTLRDLPELSSLCRSGLLVGW 654
            E L++  + N+  +    TH D  ++       L  L+ELTL +LP ++S+C     + W
Sbjct: 963  ECLEIVCNENLKYVFGQSTHNDGQNQNELKIIELSALEELTLVNLPNINSICPEDCYLMW 1022

Query: 655  PSLVSLRICECGNLKRLPFNT----HSVPKLKE 741
            PSL+   +  CG    +  NT    H+ P++ E
Sbjct: 1023 PSLLQFNLQNCGEFFMVSINTCMALHNNPRINE 1055


>emb|CAN74479.1| hypothetical protein VITISV_019238 [Vitis vinifera]
          Length = 265

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 8/244 (3%)
 Frame = +1

Query: 88  SNNLKLLDVQYGKFKFLTSGSVDKAFSNLEELRLNGLSKFEAICDGEVPLQFLQKLRVLN 267
           +N LKL+D        L       AF  +    ++ LS F         ++ + K+ V  
Sbjct: 26  NNXLKLVDXNGVNPIMLKXLMKTYAFGLINHKGVSRLSDFG--------MKNMDKMLVCL 77

Query: 268 VGFCGNVITLLPCDLTVR--LQNLEKITVIWCLYLENLFGASIWLSSPIFP----HLRHV 429
           +  C  + T++  +   +  L+ LE + +   L LE     SIW   P++P     L+++
Sbjct: 78  IEGCNEIKTIINGNGITQGVLKCLEXLCINNVLKLE-----SIW-QGPVYPXSLAQLKNL 131

Query: 430 EIKRCERMKYIFPLGVVRHLLHLEVLDVEYSFNMDTIITHEDD--ADKAILPQLKELTLR 603
            + +C  +K IF  G+++ L  L+ L VE    ++ I+   ++   +  +LP LK L L 
Sbjct: 132 TLSKCXELKKIFSKGMIQQLPQLQYLRVEDCRQIEEIVMESENNGLEANVLPSLKTLILL 191

Query: 604 DLPELSSLCRSGLLVGWPSLVSLRICECGNLKRLPFNTHSVPKLKEFVMDRDLFNRLEWE 783
           DLP+L+S+     L  WPSL  ++I  C  L+RLPFN  +  KL+           L W+
Sbjct: 192 DLPKLTSIWVDDSLE-WPSLQXIKISMCNMLRRLPFNNANATKLRFIEGQESWXGALMWD 250

Query: 784 DESV 795
           D++V
Sbjct: 251 DDAV 254


Top