BLASTX nr result

ID: Coptis23_contig00022176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022176
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244...    88   6e-16
ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812...    78   7e-13
ref|XP_002877614.1| hypothetical protein ARALYDRAFT_485209 [Arab...    77   1e-12
ref|XP_002866549.1| hypothetical protein ARALYDRAFT_496519 [Arab...    74   2e-11

>ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera]
          Length = 289

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = +3

Query: 84  MDGRGGECCIARYPRGAYDNSKIDRIMLRFRPIAPKPVS--SAGGTSPGENEALFKTSGR 257
           MD +GG CCIARY  GAYD SK+DRIMLRFRPIAPKP S  S  G S  +++ ++  +GR
Sbjct: 1   MDAKGG-CCIARYAGGAYDMSKVDRIMLRFRPIAPKPTSAGSVSGGSTLKSDEVYLRTGR 59

Query: 258 VKRKYIRDNSNNNNNK 305
            KR+Y+RDNS   N K
Sbjct: 60  GKRRYVRDNSKRCNRK 75


>ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|222869226|gb|EEF06357.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/84 (59%), Positives = 56/84 (66%), Gaps = 10/84 (11%)
 Frame = +3

Query: 84  MDGRGGECCIARYPRG--AYDNSKIDRIMLRFRPIAPKPVS--------SAGGTSPGENE 233
           MDGRGG CCIARY  G  AYD SK+DRIMLRFRPIAPKP +        S GG+SP  ++
Sbjct: 1   MDGRGG-CCIARYAGGGGAYDMSKVDRIMLRFRPIAPKPSTAPSSAAFVSGGGSSPEMSD 59

Query: 234 ALFKTSGRVKRKYIRDNSNNNNNK 305
           A    SGR KRKY  + SN NN K
Sbjct: 60  A-SPRSGRGKRKY-NNTSNGNNTK 81


>ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812834 [Glycine max]
          Length = 290

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
 Frame = +3

Query: 84  MDGRGGECCIARYPRGAYDNSKIDRIMLRFRPIAPKPVSSAGGT--SPGENEALFKTSGR 257
           MDGRGG CCIARY  GA   S +D+IMLRFRPIAPKP ++A  +  S  E+   F  +G 
Sbjct: 1   MDGRGG-CCIARYVPGASHGSTVDKIMLRFRPIAPKPAAAATASDGSSSESSDAFLKNGT 59

Query: 258 VKRKYIRDNSNNNNNK 305
            KRKY+RDN+  +  +
Sbjct: 60  TKRKYVRDNNYTSKRR 75


>ref|XP_002877614.1| hypothetical protein ARALYDRAFT_485209 [Arabidopsis lyrata subsp.
           lyrata] gi|297323452|gb|EFH53873.1| hypothetical protein
           ARALYDRAFT_485209 [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/83 (53%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
 Frame = +3

Query: 84  MDGRGGECCIARYPRGA--YDNSKIDRIMLRFRPIAPKPVS-------SAGGTSPGENEA 236
           MDGRGG CCIARY  G+  YD SK DRIMLRFRPIAPKP S       S+G +  G ++ 
Sbjct: 1   MDGRGG-CCIARYAIGSGPYDLSKADRIMLRFRPIAPKPASPGGVTPVSSGDSGGGSSDV 59

Query: 237 LFKTSGRVKRKYIRDNSNNNNNK 305
            F+++GR KRK  +   N  N K
Sbjct: 60  SFRSAGRRKRKCHQQKENGGNAK 82


>ref|XP_002866549.1| hypothetical protein ARALYDRAFT_496519 [Arabidopsis lyrata subsp.
           lyrata] gi|297312384|gb|EFH42808.1| hypothetical protein
           ARALYDRAFT_496519 [Arabidopsis lyrata subsp. lyrata]
          Length = 304

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/89 (50%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
 Frame = +3

Query: 84  MDGRGGECCIARYP--RGAYDNSKIDRIMLRFRPIAPKPVSSAGG-------------TS 218
           MDG GG CCIARY    G Y  SK DRIMLRFRPIAPKP S  GG             T+
Sbjct: 1   MDGSGG-CCIARYGVYGGRYGLSKADRIMLRFRPIAPKPASDGGGSVSPVTGKYGSPTTT 59

Query: 219 PGENEALFKTSGRVKRKYIRDNSNNNNNK 305
            G +  +   SGR KRKY RD+S  N+ +
Sbjct: 60  SGGSSDVSGKSGRGKRKYQRDSSGGNSRR 88


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