BLASTX nr result

ID: Coptis23_contig00022166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022166
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA41425.1| TPA: hypothetical protein ZEAMMB73_768330 [Zea m...    60   2e-07
ref|XP_004141704.1| PREDICTED: exportin-T-like [Cucumis sativus]...    60   2e-07
ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arab...    60   2e-07
ref|XP_002273606.1| PREDICTED: exportin-T [Vitis vinifera] gi|29...    60   2e-07
emb|CAN84172.1| hypothetical protein VITISV_042408 [Vitis vinifera]    60   2e-07

>tpg|DAA41425.1| TPA: hypothetical protein ZEAMMB73_768330 [Zea mays]
          Length = 965

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   VPGFQKFIVETFATNCCFYSVIDKSFDLRDAN 96
           VPGF+ F++E FATNCC YSV+DKSFDLRDAN
Sbjct: 836 VPGFRVFMIEKFATNCCLYSVLDKSFDLRDAN 867


>ref|XP_004141704.1| PREDICTED: exportin-T-like [Cucumis sativus]
           gi|449523616|ref|XP_004168819.1| PREDICTED:
           exportin-T-like [Cucumis sativus]
          Length = 990

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   VPGFQKFIVETFATNCCFYSVIDKSFDLRDAN 96
           VPGFQ FI+E FATNCC YSV+DKSF+L DAN
Sbjct: 880 VPGFQSFIIEGFATNCCLYSVLDKSFELHDAN 911


>ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arabidopsis lyrata subsp.
           lyrata] gi|297334725|gb|EFH65143.1| hypothetical protein
           ARALYDRAFT_476390 [Arabidopsis lyrata subsp. lyrata]
          Length = 978

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   VPGFQKFIVETFATNCCFYSVIDKSFDLRDAN 96
           VPGFQ F++E FATNCC YSV+DKSFD  DAN
Sbjct: 868 VPGFQNFVIEAFATNCCLYSVLDKSFDFSDAN 899


>ref|XP_002273606.1| PREDICTED: exportin-T [Vitis vinifera] gi|297742994|emb|CBI35861.3|
           unnamed protein product [Vitis vinifera]
          Length = 992

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   VPGFQKFIVETFATNCCFYSVIDKSFDLRDAN 96
           VPGFQ FI+E FATNCC YSV+D+SF+ RDAN
Sbjct: 882 VPGFQSFIIEVFATNCCLYSVLDRSFEFRDAN 913


>emb|CAN84172.1| hypothetical protein VITISV_042408 [Vitis vinifera]
          Length = 251

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   VPGFQKFIVETFATNCCFYSVIDKSFDLRDAN 96
           VPGFQ FI+E FATNCC YSV+D+SF+ RDAN
Sbjct: 141 VPGFQSFIIEVFATNCCLYSVLDRSFEFRDAN 172


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