BLASTX nr result

ID: Coptis23_contig00022162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022162
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   187   2e-45
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   153   4e-35
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   148   1e-33

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  187 bits (475), Expect = 2e-45
 Identities = 106/240 (44%), Positives = 151/240 (62%), Gaps = 1/240 (0%)
 Frame = -1

Query: 719  LGLEIKVRQECEELVGRSSSDDMVKQKQHXXXXXXXXXXXXXRKVVFRHDASKFTRLKSE 540
            L LE KVRQEC+ LVG  S+ +  KQ+               +K+VFR D  KF  LK E
Sbjct: 3149 LELETKVRQECDHLVGWFSTREADKQRAKALENLKVERERLQKKMVFRSDPGKFKDLKHE 3208

Query: 539  CADFVE-LTTSITELTKNVTSMSTPQMIRKAINWQETATSFINRLSDEYAAYADIVQPVQ 363
              +F++ +T  + +L +N+  M    MI +  NWQETAT F+NRLSDEYAAY DI+QPVQ
Sbjct: 3209 FGEFLKRVTYLVDDLMRNIEVMDLQVMIGEVCNWQETATCFVNRLSDEYAAYTDIIQPVQ 3268

Query: 362  VAVYEMKLGLSLIVSSALQKTFLAKLEEGNTESILETIHAFMQFPRGFEVQSSTNEASNL 183
            VAVYEMKLGLSL++SS+LQK F  ++ + N + IL TI++F++FPR     +  + A  +
Sbjct: 3269 VAVYEMKLGLSLVLSSSLQKGFQNRVMQDNMDGILATIYSFIRFPRD---NAGESIAVEV 3325

Query: 182  SSVFFHSGQDVSADILAMDRNILKKLCTVSRDNSSDKTVSVLQLHATLDHNFLARIRQSV 3
               F   G    +++ ++D N+L+KL T++R  ++D+TVSVLQL A +  N L R+   V
Sbjct: 3326 KFEFPSYGVGSPSNVWSLDMNVLEKLVTITRGLNADRTVSVLQLKAAVRQNILVRVAHFV 3385


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  187 bits (475), Expect = 2e-45
 Identities = 106/240 (44%), Positives = 151/240 (62%), Gaps = 1/240 (0%)
 Frame = -1

Query: 719  LGLEIKVRQECEELVGRSSSDDMVKQKQHXXXXXXXXXXXXXRKVVFRHDASKFTRLKSE 540
            L LE KVRQEC+ LVG  S+ +  KQ+               +K+VFR D  KF  LK E
Sbjct: 3046 LELETKVRQECDHLVGWFSTREADKQRAKALENLKVERERLQKKMVFRSDPGKFKDLKHE 3105

Query: 539  CADFVE-LTTSITELTKNVTSMSTPQMIRKAINWQETATSFINRLSDEYAAYADIVQPVQ 363
              +F++ +T  + +L +N+  M    MI +  NWQETAT F+NRLSDEYAAY DI+QPVQ
Sbjct: 3106 FGEFLKRVTYLVDDLMRNIEVMDLQVMIGEVCNWQETATCFVNRLSDEYAAYTDIIQPVQ 3165

Query: 362  VAVYEMKLGLSLIVSSALQKTFLAKLEEGNTESILETIHAFMQFPRGFEVQSSTNEASNL 183
            VAVYEMKLGLSL++SS+LQK F  ++ + N + IL TI++F++FPR     +  + A  +
Sbjct: 3166 VAVYEMKLGLSLVLSSSLQKGFQNRVMQDNMDGILATIYSFIRFPRD---NAGESIAVEV 3222

Query: 182  SSVFFHSGQDVSADILAMDRNILKKLCTVSRDNSSDKTVSVLQLHATLDHNFLARIRQSV 3
               F   G    +++ ++D N+L+KL T++R  ++D+TVSVLQL A +  N L R+   V
Sbjct: 3223 KFEFPSYGVGSPSNVWSLDMNVLEKLVTITRGLNADRTVSVLQLKAAVRQNILVRVAHFV 3282


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  160 bits (406), Expect = 2e-37
 Identities = 92/239 (38%), Positives = 137/239 (57%)
 Frame = -1

Query: 719  LGLEIKVRQECEELVGRSSSDDMVKQKQHXXXXXXXXXXXXXRKVVFRHDASKFTRLKSE 540
            L LEIKVRQEC+ L GR SS +  K++               +K+VFR +  KF  L+ E
Sbjct: 3187 LELEIKVRQECDYLAGRLSSIEADKKRADSLERLEFECRRIQKKMVFRCNPLKFNALRKE 3246

Query: 539  CADFVELTTSITELTKNVTSMSTPQMIRKAINWQETATSFINRLSDEYAAYADIVQPVQV 360
            C +F++    +  L  N+  M   Q++ +A NWQ TATSFI+RLSDEY  Y D+ QP QV
Sbjct: 3247 CGEFLKPARMVVGLVDNIEGMDLQQVLEQASNWQATATSFIDRLSDEYKEYIDLAQPFQV 3306

Query: 359  AVYEMKLGLSLIVSSALQKTFLAKLEEGNTESILETIHAFMQFPRGFEVQSSTNEASNLS 180
            AVYEMKLGLSL++S AL K  L +++E N + ++E+I++FM+FPR      S++ +    
Sbjct: 3307 AVYEMKLGLSLVLSFALLKKVLNRIKEDNMDRVMESIYSFMRFPRVRAFVPSSSHSIGSP 3366

Query: 179  SVFFHSGQDVSADILAMDRNILKKLCTVSRDNSSDKTVSVLQLHATLDHNFLARIRQSV 3
            + F+             +   L+KL  +S + +++K  S+LQL   L  N + R+   V
Sbjct: 3367 ATFWD-----------REMGFLEKLNMLSSEVTTEKMGSILQLKTGLYQNIVVRVAHFV 3414


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  153 bits (386), Expect = 4e-35
 Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 2/237 (0%)
 Frame = -1

Query: 719  LGLEIKVRQECEELVGRSSSDDMVKQKQHXXXXXXXXXXXXXRKVVFRHDASKFTRLKSE 540
            L LEIKVRQEC+ L G   +    K++               RK+VFR + SKF+ L+ +
Sbjct: 3129 LELEIKVRQECDYLAGWFGTRKADKKRVESLQMLEVERKRLQRKMVFRSNPSKFSALRKD 3188

Query: 539  CADFVELTTSITELTKNVTSMSTPQMIRKAINWQETATSFINRLSDEYAAYADIVQPVQV 360
            C +F      + +L  NV  +   Q + +  +WQ+TAT FI +LS++Y  Y D+ QPVQV
Sbjct: 3189 CKEFFRRVMVVMDLVSNVEVVEFQQFLIQVSDWQKTATCFIEQLSNDYKEYIDVAQPVQV 3248

Query: 359  AVYEMKLGLSLIVSSALQKTFLAKLEEGNTESILETIHAFMQFPRGFEVQSSTNEASNLS 180
            A+YEMKLGLSL++S+AL K    K+E  N E ++E+I +FM+FPRG+ + S         
Sbjct: 3249 AIYEMKLGLSLVLSAALWKRNSNKIEVDNMEQVMESICSFMRFPRGYGLDSI-------- 3300

Query: 179  SVFFHSGQDVSA--DILAMDRNILKKLCTVSRDNSSDKTVSVLQLHATLDHNFLARI 15
                 S  D+ A  + L    N+L+K+ ++S D ++++  SVLQL  +L  N L  +
Sbjct: 3301 -----SSNDIYAPLNFLEQQTNLLEKVVSLSSDINAERGASVLQLKTSLHLNILVHV 3352


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  148 bits (373), Expect = 1e-33
 Identities = 90/250 (36%), Positives = 139/250 (55%), Gaps = 11/250 (4%)
 Frame = -1

Query: 719  LGLEIKVRQECEELVGRSSSDDMVKQKQHXXXXXXXXXXXXXRKVVFRHDASKFTRLKSE 540
            L LEI+VR+EC  L G+  + +  K+K               RK+VFR ++ K+ +L +E
Sbjct: 2895 LELEIQVRKECGYLSGQFLTVEADKRKAERLEKLQAELRKLQRKIVFRSESWKYKKLMNE 2954

Query: 539  CADFVELTTSITELTKNVTSMSTPQMIRKAINWQETATSFINRLSDEYAAYADIVQPVQV 360
            C +F++   S+  L  NV +    Q+I +  +WQETA  FINRL+DEY AY DI+QP+QV
Sbjct: 2955 CDEFLKHIASLEVLVGNVEAEDLQQVIDRTHSWQETAMCFINRLTDEYTAYNDIIQPIQV 3014

Query: 359  AVYEMKLGLSLIVSSALQKTFLAKLEEGNTESILETIHAFMQFPRGFEVQSSTNEASNLS 180
            AVYEMK GLSL++SS L+K +L K+   N   + + I+  M+FPR              +
Sbjct: 3015 AVYEMKFGLSLVLSSFLEKEYLRKVGHENINLVTDMIYILMRFPRA-------------A 3061

Query: 179  SVFFHSGQDVSADI-----------LAMDRNILKKLCTVSRDNSSDKTVSVLQLHATLDH 33
            S  F S +DV  D+             ++  ++++L T+S   S+DK VS ++  A++  
Sbjct: 3062 SWKFISVEDVGVDLHSSYKLDFGTDFYLNMGLIERLITLSSGVSADKKVSAMRCRASIYW 3121

Query: 32   NFLARIRQSV 3
            N L +I  S+
Sbjct: 3122 NILVQIAYSI 3131


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