BLASTX nr result

ID: Coptis23_contig00022149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022149
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19410.3| unnamed protein product [Vitis vinifera]               97   3e-28
ref|XP_003634430.1| PREDICTED: uncharacterized protein LOC100854...    97   3e-28
ref|XP_002510105.1| protein with unknown function [Ricinus commu...   106   5e-26
ref|XP_002320692.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-22
ref|XP_003523616.1| PREDICTED: uncharacterized protein LOC100778...    87   2e-21

>emb|CBI19410.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 96.7 bits (239), Expect(2) = 3e-28
 Identities = 52/92 (56%), Positives = 63/92 (68%)
 Frame = +2

Query: 305 SAKTAILASQXXXXXXXXXSFDDLGLNVVESGFEDDENLGDRIKSAPMKSSGSEAESTAP 484
           SAKTA L  Q         SFDDLGL+VVESG  + E L D+I S   K  G+++E+  P
Sbjct: 664 SAKTAALVMQYEYEDEYDDSFDDLGLSVVESGLAETEILEDKINSNLGKPWGTQSETFGP 723

Query: 485 NKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVA 580
           + S  +WNSRK PQFYVKDGKNYSYK++GSVA
Sbjct: 724 SDSS-KWNSRKKPQFYVKDGKNYSYKIAGSVA 754



 Score = 55.5 bits (132), Expect(2) = 3e-28
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = +3

Query: 666 ADSREAALVNQAQKEVIXXXXXXXXXXXXAVKKLTESNEQQDQEASDVIEVGGRGRPAS 842
           A+  EA++VNQAQKE+I            AVKKLTE NE +D E S+++E+GGRG+P +
Sbjct: 756 ANCIEASIVNQAQKELIHGLGRGGNLPLGAVKKLTELNEDED-EQSEIVEMGGRGKPGN 813


>ref|XP_003634430.1| PREDICTED: uncharacterized protein LOC100854438 [Vitis vinifera]
          Length = 866

 Score = 96.7 bits (239), Expect(2) = 3e-28
 Identities = 52/92 (56%), Positives = 63/92 (68%)
 Frame = +2

Query: 305 SAKTAILASQXXXXXXXXXSFDDLGLNVVESGFEDDENLGDRIKSAPMKSSGSEAESTAP 484
           SAKTA L  Q         SFDDLGL+VVESG  + E L D+I S   K  G+++E+  P
Sbjct: 648 SAKTAALVMQYEYEDEYDDSFDDLGLSVVESGLAETEILEDKINSNLGKPWGTQSETFGP 707

Query: 485 NKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVA 580
           + S  +WNSRK PQFYVKDGKNYSYK++GSVA
Sbjct: 708 SDSS-KWNSRKKPQFYVKDGKNYSYKIAGSVA 738



 Score = 55.5 bits (132), Expect(2) = 3e-28
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = +3

Query: 666 ADSREAALVNQAQKEVIXXXXXXXXXXXXAVKKLTESNEQQDQEASDVIEVGGRGRPAS 842
           A+  EA++VNQAQKE+I            AVKKLTE NE +D E S+++E+GGRG+P +
Sbjct: 740 ANCIEASIVNQAQKELIHGLGRGGNLPLGAVKKLTELNEDED-EQSEIVEMGGRGKPGN 797


>ref|XP_002510105.1| protein with unknown function [Ricinus communis]
            gi|223550806|gb|EEF52292.1| protein with unknown function
            [Ricinus communis]
          Length = 2020

 Score =  106 bits (265), Expect(2) = 5e-26
 Identities = 54/92 (58%), Positives = 64/92 (69%)
 Frame = +2

Query: 305  SAKTAILASQXXXXXXXXXSFDDLGLNVVESGFEDDENLGDRIKSAPMKSSGSEAESTAP 484
            +A+T  L SQ         SFDDLGL+V ESG E++E L DRI S   KSSG++ ESTA 
Sbjct: 1798 AARTVALISQYEYEDEYDDSFDDLGLSVAESGLEENETLSDRISSNLGKSSGADTESTAQ 1857

Query: 485  NKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVA 580
              S  +W SRK PQFYVKDGKNYSYKV+GS+A
Sbjct: 1858 ASSNSKWGSRKKPQFYVKDGKNYSYKVTGSIA 1889



 Score = 38.1 bits (87), Expect(2) = 5e-26
 Identities = 23/56 (41%), Positives = 30/56 (53%)
 Frame = +3

Query: 663  VADSREAALVNQAQKEVIXXXXXXXXXXXXAVKKLTESNEQQDQEASDVIEVGGRG 830
            VA+S EA L++Q Q + I            AVK+ TE  EQQ ++ SD  E  GRG
Sbjct: 1890 VANSNEALLLSQIQADQIYGLGRGGNIPTGAVKQWTEYQEQQHRKESDEPETEGRG 1945


>ref|XP_002320692.1| predicted protein [Populus trichocarpa] gi|222861465|gb|EEE99007.1|
            predicted protein [Populus trichocarpa]
          Length = 1944

 Score = 97.1 bits (240), Expect(2) = 2e-22
 Identities = 49/92 (53%), Positives = 63/92 (68%)
 Frame = +2

Query: 305  SAKTAILASQXXXXXXXXXSFDDLGLNVVESGFEDDENLGDRIKSAPMKSSGSEAESTAP 484
            +A+ A L SQ         SFDDLG +V +SG E++E LG+RI S    SSG++ E++A 
Sbjct: 1727 TARMAALISQYEYEDEYDDSFDDLGFSVADSGVEENELLGNRINSNSGISSGTKTETSAQ 1786

Query: 485  NKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVA 580
            N    +W SRK PQ+YVKDGKNYSYKV+GSVA
Sbjct: 1787 NSPNTKWGSRKKPQYYVKDGKNYSYKVAGSVA 1818



 Score = 35.4 bits (80), Expect(2) = 2e-22
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = +3

Query: 663  VADSREAALVNQAQKEVIXXXXXXXXXXXXAVKKLTESNEQQDQEASDVIEVGGRG 830
            VA++ EA+L+NQ   E I            A KKL E  E +D++ SD  E+ GRG
Sbjct: 1819 VANANEASLINQVHGEQIHGLGRGGNIPLGATKKLAEYQE-KDRDQSDEPEMEGRG 1873


>ref|XP_003523616.1| PREDICTED: uncharacterized protein LOC100778129 [Glycine max]
          Length = 843

 Score = 86.7 bits (213), Expect(2) = 2e-21
 Identities = 42/92 (45%), Positives = 60/92 (65%)
 Frame = +2

Query: 305 SAKTAILASQXXXXXXXXXSFDDLGLNVVESGFEDDENLGDRIKSAPMKSSGSEAESTAP 484
           +++TA +  Q         SFDDLGL+V +SG E++E LGD+I +    S  + + ++  
Sbjct: 625 TSRTAAMILQYEYEDEYDDSFDDLGLSVADSGVEENETLGDQINAKSGNSWATGSGNSVK 684

Query: 485 NKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVA 580
           N    +W SRK PQ+YVKDGKNYSYKV+G+VA
Sbjct: 685 NAPDSKWGSRKKPQYYVKDGKNYSYKVAGAVA 716



 Score = 42.7 bits (99), Expect(2) = 2e-21
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = +3

Query: 663 VADSREAALVNQAQKEVIXXXXXXXXXXXXAVKKLTESNEQQDQEASDVIEVGGRG 830
           VA+S EA+L+ QAQKE+I            AVKK+T+S ++ D + S V E+ GRG
Sbjct: 717 VANSDEASLITQAQKELIHGLGRGGNLPLDAVKKVTDSYKEDDNQ-SQVSEMEGRG 771


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