BLASTX nr result

ID: Coptis23_contig00022125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022125
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518826.1| conserved hypothetical protein [Ricinus comm...    90   3e-22
ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vi...    90   1e-21
dbj|BAD02983.1| putative sno protein [Oryza sativa Japonica Group]     91   4e-21
ref|XP_004139916.1| PREDICTED: protein strawberry notch-like [Cu...    90   4e-21
ref|XP_004154610.1| PREDICTED: succinate-semialdehyde dehydrogen...    90   4e-21

>ref|XP_002518826.1| conserved hypothetical protein [Ricinus communis]
           gi|223541999|gb|EEF43544.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1281

 Score = 89.7 bits (221), Expect(2) = 3e-22
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = +3

Query: 3   EGVIFLTYNSLITSPEKGCTRLQQFLHWCVSDYEGLLVFDECHKAKNLILETGSLPTLTG 182
           EGV+FLTY+SLI S EKG +RLQQ + WC S ++GL++FDECHKAKNL+ E GS PT TG
Sbjct: 344 EGVVFLTYSSLIASSEKGRSRLQQLVQWCGSGFDGLVIFDECHKAKNLVPEAGSQPTRTG 403



 Score = 40.0 bits (92), Expect(2) = 3e-22
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +1

Query: 181 GEDVVEIQAQLPEACVINCSATGAS 255
           GE V+EIQA+LPEA VI CSATGAS
Sbjct: 403 GEAVLEIQARLPEARVIYCSATGAS 427


>ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vitis vinifera]
          Length = 1242

 Score = 89.7 bits (221), Expect(2) = 1e-21
 Identities = 40/60 (66%), Positives = 48/60 (80%)
 Frame = +3

Query: 3   EGVIFLTYNSLITSPEKGCTRLQQFLHWCVSDYEGLLVFDECHKAKNLILETGSLPTLTG 182
           EGV+FLTY+SLI S EKG +RLQQ + WC S Y+GL++FDECHKAKNL+ E G  PT TG
Sbjct: 301 EGVVFLTYSSLIASSEKGRSRLQQLVQWCGSGYDGLVIFDECHKAKNLVPEAGGQPTRTG 360



 Score = 38.1 bits (87), Expect(2) = 1e-21
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +1

Query: 181 GEDVVEIQAQLPEACVINCSATGAS 255
           GE V+E+QA+LP+A VI CSATGAS
Sbjct: 360 GEAVLELQARLPDARVIYCSATGAS 384


>dbj|BAD02983.1| putative sno protein [Oryza sativa Japonica Group]
          Length = 1398

 Score = 90.5 bits (223), Expect(2) = 4e-21
 Identities = 42/59 (71%), Positives = 49/59 (83%)
 Frame = +3

Query: 6   GVIFLTYNSLITSPEKGCTRLQQFLHWCVSDYEGLLVFDECHKAKNLILETGSLPTLTG 182
           GVIF+TY+SLI S EKG +RLQQ + WC S+++GLLVFDECHKAKNLI E GS PT TG
Sbjct: 374 GVIFVTYSSLIASSEKGRSRLQQLIEWCGSEFDGLLVFDECHKAKNLIPEAGSQPTRTG 432



 Score = 35.8 bits (81), Expect(2) = 4e-21
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +1

Query: 181 GEDVVEIQAQLPEACVINCSATGAS 255
           G+ V+EIQ  LPEA V+ CSATGAS
Sbjct: 432 GKAVLEIQEMLPEARVVYCSATGAS 456


>ref|XP_004139916.1| PREDICTED: protein strawberry notch-like [Cucumis sativus]
          Length = 1267

 Score = 89.7 bits (221), Expect(2) = 4e-21
 Identities = 39/60 (65%), Positives = 51/60 (85%)
 Frame = +3

Query: 3   EGVIFLTYNSLITSPEKGCTRLQQFLHWCVSDYEGLLVFDECHKAKNLILETGSLPTLTG 182
           EGVIFLTY+SLI S E+G +RLQQ + WC ++++GL++FDECHKAKNL+ E+GS PT TG
Sbjct: 326 EGVIFLTYSSLIASSERGRSRLQQLVQWCGTEFDGLIIFDECHKAKNLVPESGSQPTRTG 385



 Score = 36.6 bits (83), Expect(2) = 4e-21
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 181 GEDVVEIQAQLPEACVINCSATGAS 255
           GE V+E+Q +LPEA +I CSATGAS
Sbjct: 385 GEAVLELQDRLPEARIIYCSATGAS 409


>ref|XP_004154610.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like
           [Cucumis sativus]
          Length = 432

 Score = 89.7 bits (221), Expect(2) = 4e-21
 Identities = 39/60 (65%), Positives = 51/60 (85%)
 Frame = +3

Query: 3   EGVIFLTYNSLITSPEKGCTRLQQFLHWCVSDYEGLLVFDECHKAKNLILETGSLPTLTG 182
           EGVIFLTY+SLI S E+G +RLQQ + WC ++++GL++FDECHKAKNL+ E+GS PT TG
Sbjct: 286 EGVIFLTYSSLIASSERGRSRLQQLVQWCGTEFDGLIIFDECHKAKNLVPESGSQPTRTG 345



 Score = 36.6 bits (83), Expect(2) = 4e-21
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 181 GEDVVEIQAQLPEACVINCSATGAS 255
           GE V+E+Q +LPEA +I CSATGAS
Sbjct: 345 GEAVLELQDRLPEARIIYCSATGAS 369


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