BLASTX nr result
ID: Coptis23_contig00022120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00022120 (391 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEO36233.1| hypothetical protein [Amblyomma maculatum] 129 3e-28 ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-l... 121 7e-26 ref|XP_002310906.1| high mobility group family [Populus trichoca... 118 4e-25 ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-l... 116 2e-24 ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycin... 115 3e-24 >gb|AEO36233.1| hypothetical protein [Amblyomma maculatum] Length = 208 Score = 129 bits (323), Expect = 3e-28 Identities = 64/115 (55%), Positives = 79/115 (68%) Frame = -1 Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212 ++KRA+DGSAFTRCE CN+DV VVLIDMHSCS +SK+RM +E QV+ K Sbjct: 21 TMKRARDGSAFTRCEVCNKDVPVVLIDMHSCSLDSKIRMNLEAQVVEKETEVKNKPVERK 80 Query: 211 RVGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPENVGIFS 47 R P+ + K K+ KK+ N N PKR PTA+FLFMDDFRK YKE HP+N + S Sbjct: 81 RAA-PSENKERKVKKGKKNVNTNKPKRAPTAFFLFMDDFRKEYKELHPDNKSVAS 134 >ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera] gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera] gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera] Length = 190 Score = 121 bits (303), Expect = 7e-26 Identities = 59/113 (52%), Positives = 77/113 (68%) Frame = -1 Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212 SLKRA+DGSAF RCEEC +DV VVLIDMHSCS E+K+++ +E QV+ K Sbjct: 16 SLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVV-EKVTDVKKKPAEK 74 Query: 211 RVGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPENVGI 53 + K +R +K +PNMPKRPPTA+FLFMDDFRK YKE++P++ + Sbjct: 75 KNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNV 127 >ref|XP_002310906.1| high mobility group family [Populus trichocarpa] gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa] gi|222853809|gb|EEE91356.1| high mobility group family [Populus trichocarpa] Length = 201 Score = 118 bits (296), Expect = 4e-25 Identities = 58/110 (52%), Positives = 73/110 (66%) Frame = -1 Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212 SL RAKDGSAFT+CEEC +DV V LI HSCS ++K++M +E QV+ K Sbjct: 22 SLVRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKMNLEAQVVEKPTEAKQKPAERK 81 Query: 211 RVGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPEN 62 + G K K+ KK +PN PKRPPTA+FLFMDDFRK YKEA+P++ Sbjct: 82 K-GSSTEPKLKKAKKEKKGRDPNAPKRPPTAFFLFMDDFRKEYKEANPDS 130 >ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus] gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus] Length = 207 Score = 116 bits (290), Expect = 2e-24 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%) Frame = -1 Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212 SL RAKDGSAF RC+EC + V V LI MHSCS ++K+RM +E Q + + Sbjct: 26 SLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKR 85 Query: 211 RVG-RPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPENVGI 53 P + + K+ KK +PN PKRPPTA+F+FMDDFRKSYKEA+P++ G+ Sbjct: 86 SASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGV 139 >ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max] gi|255628875|gb|ACU14782.1| unknown [Glycine max] Length = 209 Score = 115 bits (289), Expect = 3e-24 Identities = 55/109 (50%), Positives = 75/109 (68%) Frame = -1 Query: 388 LKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXKR 209 L RAKDGSAF RC++C ++V V LIDMHSCS E+K++M ++ QV+ + Sbjct: 21 LVRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVVEQAAEAKKPERKKPK 80 Query: 208 VGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPEN 62 P + A GK KK +PNMPKRPPTA+F+F+DDFRKS+KEA+P++ Sbjct: 81 SKEPMAKKAKVGK-GKKVKDPNMPKRPPTAFFVFLDDFRKSFKEANPDS 128