BLASTX nr result

ID: Coptis23_contig00022120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022120
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]             129   3e-28
ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-l...   121   7e-26
ref|XP_002310906.1| high mobility group family [Populus trichoca...   118   4e-25
ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-l...   116   2e-24
ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycin...   115   3e-24

>gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
          Length = 208

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/115 (55%), Positives = 79/115 (68%)
 Frame = -1

Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212
           ++KRA+DGSAFTRCE CN+DV VVLIDMHSCS +SK+RM +E QV+             K
Sbjct: 21  TMKRARDGSAFTRCEVCNKDVPVVLIDMHSCSLDSKIRMNLEAQVVEKETEVKNKPVERK 80

Query: 211 RVGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPENVGIFS 47
           R   P+ +   K K+ KK+ N N PKR PTA+FLFMDDFRK YKE HP+N  + S
Sbjct: 81  RAA-PSENKERKVKKGKKNVNTNKPKRAPTAFFLFMDDFRKEYKELHPDNKSVAS 134


>ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
           gi|147815109|emb|CAN61363.1| hypothetical protein
           VITISV_034306 [Vitis vinifera]
           gi|297742725|emb|CBI35359.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/113 (52%), Positives = 77/113 (68%)
 Frame = -1

Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212
           SLKRA+DGSAF RCEEC +DV VVLIDMHSCS E+K+++ +E QV+             K
Sbjct: 16  SLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVV-EKVTDVKKKPAEK 74

Query: 211 RVGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPENVGI 53
           +          K +R +K  +PNMPKRPPTA+FLFMDDFRK YKE++P++  +
Sbjct: 75  KNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNV 127


>ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
           gi|118483462|gb|ABK93630.1| unknown [Populus
           trichocarpa] gi|222853809|gb|EEE91356.1| high mobility
           group family [Populus trichocarpa]
          Length = 201

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/110 (52%), Positives = 73/110 (66%)
 Frame = -1

Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212
           SL RAKDGSAFT+CEEC +DV V LI  HSCS ++K++M +E QV+             K
Sbjct: 22  SLVRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKMNLEAQVVEKPTEAKQKPAERK 81

Query: 211 RVGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPEN 62
           + G        K K+ KK  +PN PKRPPTA+FLFMDDFRK YKEA+P++
Sbjct: 82  K-GSSTEPKLKKAKKEKKGRDPNAPKRPPTAFFLFMDDFRKEYKEANPDS 130


>ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
           gi|449531370|ref|XP_004172659.1| PREDICTED: high
           mobility group B protein 7-like [Cucumis sativus]
          Length = 207

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
 Frame = -1

Query: 391 SLKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXK 212
           SL RAKDGSAF RC+EC + V V LI MHSCS ++K+RM +E Q +             +
Sbjct: 26  SLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKPAEKKR 85

Query: 211 RVG-RPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPENVGI 53
                P +  +   K+ KK  +PN PKRPPTA+F+FMDDFRKSYKEA+P++ G+
Sbjct: 86  SASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGV 139


>ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max]
           gi|255628875|gb|ACU14782.1| unknown [Glycine max]
          Length = 209

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/109 (50%), Positives = 75/109 (68%)
 Frame = -1

Query: 388 LKRAKDGSAFTRCEECNRDVAVVLIDMHSCSQESKLRMKMELQVIXXXXXXXXXXXXXKR 209
           L RAKDGSAF RC++C ++V V LIDMHSCS E+K++M ++ QV+              +
Sbjct: 21  LVRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVVEQAAEAKKPERKKPK 80

Query: 208 VGRPASSAASKGKRTKKSTNPNMPKRPPTAYFLFMDDFRKSYKEAHPEN 62
              P +  A  GK  KK  +PNMPKRPPTA+F+F+DDFRKS+KEA+P++
Sbjct: 81  SKEPMAKKAKVGK-GKKVKDPNMPKRPPTAFFVFLDDFRKSFKEANPDS 128


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