BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022106
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...   417   e-114
emb|CBI30291.3| unnamed protein product [Vitis vinifera]              417   e-114
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]   412   e-113
ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containi...   400   e-109
ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100

>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  417 bits (1072), Expect = e-114
 Identities = 196/257 (76%), Positives = 221/257 (85%)
 Frame = +2

Query: 2    LVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSY 181
            LVEEGL+YF SM K YGV P  EHYSCVIDLLGRAGRL +A+EFIN+MP+EPNAFGWCS+
Sbjct: 425  LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 484

Query: 182  LGACRTYGDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVT 361
            LGACR +GDKE G+LAAEKL+ LEP+NSG  VLLSNIYA+  QWE VRS+R  MRDG V 
Sbjct: 485  LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 544

Query: 362  KLPGYSWVDVGNKTHAFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQTESIPFDMEEA 541
            KLPGYSWVDVG KTH FGAED+SHP+   IYEKL+ LLDQI+ AGYVP+T+S+P DM+++
Sbjct: 545  KLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDS 604

Query: 542  QKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCADCHSAIKLISKVVGRKIIVRDN 721
             KE+ LH HSERIA+AFALISMP GKPIIVKKNLRVC DCHSAIK ISKV GRKIIVRDN
Sbjct: 605  MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 664

Query: 722  SRFHHFGDGLCSCGDFW 772
            SRFHHF DG CSCGD+W
Sbjct: 665  SRFHHFTDGSCSCGDYW 681


>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  417 bits (1072), Expect = e-114
 Identities = 196/257 (76%), Positives = 221/257 (85%)
 Frame = +2

Query: 2    LVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSY 181
            LVEEGL+YF SM K YGV P  EHYSCVIDLLGRAGRL +A+EFIN+MP+EPNAFGWCS+
Sbjct: 360  LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419

Query: 182  LGACRTYGDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVT 361
            LGACR +GDKE G+LAAEKL+ LEP+NSG  VLLSNIYA+  QWE VRS+R  MRDG V 
Sbjct: 420  LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 479

Query: 362  KLPGYSWVDVGNKTHAFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQTESIPFDMEEA 541
            KLPGYSWVDVG KTH FGAED+SHP+   IYEKL+ LLDQI+ AGYVP+T+S+P DM+++
Sbjct: 480  KLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDS 539

Query: 542  QKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCADCHSAIKLISKVVGRKIIVRDN 721
             KE+ LH HSERIA+AFALISMP GKPIIVKKNLRVC DCHSAIK ISKV GRKIIVRDN
Sbjct: 540  MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 599

Query: 722  SRFHHFGDGLCSCGDFW 772
            SRFHHF DG CSCGD+W
Sbjct: 600  SRFHHFTDGSCSCGDYW 616


>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  412 bits (1059), Expect = e-113
 Identities = 195/257 (75%), Positives = 218/257 (84%)
 Frame = +2

Query: 2    LVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSY 181
            LVEEGL+YF SM K YGV P  EHYSCVIDLLGRAGRL +A+EFIN+MP+EPNAFGWCS+
Sbjct: 425  LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 484

Query: 182  LGACRTYGDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVT 361
            LGACR +GDKE G+LAAEKL+ LEP+NSG  VLLSNIYA+  QWE VRS+R  MRDG V 
Sbjct: 485  LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 544

Query: 362  KLPGYSWVDVGNKTHAFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQTESIPFDMEEA 541
            KLPGYSWVDVG KTH FGAED+SH +   IYEKL+ LLDQI+ AGYVP T+S+P DM++ 
Sbjct: 545  KLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDX 604

Query: 542  QKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCADCHSAIKLISKVVGRKIIVRDN 721
             KE+ LH HSERIA+AFALISMP GKPIIVKKNLRVC DCHSAIK ISKV GRKIIVRDN
Sbjct: 605  MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 664

Query: 722  SRFHHFGDGLCSCGDFW 772
            SRFHHF DG CSCGD+W
Sbjct: 665  SRFHHFTDGSCSCGDYW 681


>ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 751

 Score =  400 bits (1029), Expect = e-109
 Identities = 180/257 (70%), Positives = 218/257 (84%)
 Frame = +2

Query: 2    LVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSY 181
            +VE+GL YF+SM K+YGV P+ EHYSCVIDLLGRAG+L +AE+FIN MP+EPN FGWCS+
Sbjct: 495  MVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSF 554

Query: 182  LGACRTYGDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVT 361
            LGAC+ +GD ER + AA+KLM LEPENSG HVLLSNIYA   QWE V+S+RKM++DG + 
Sbjct: 555  LGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMN 614

Query: 362  KLPGYSWVDVGNKTHAFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQTESIPFDMEEA 541
            KLPGYSWVD+ NKTH FG ED+SHPQ +EIYEKL+NLLDQI++ GYVPQTES+  DM++ 
Sbjct: 615  KLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDN 674

Query: 542  QKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCADCHSAIKLISKVVGRKIIVRDN 721
             KE+ LH+HSERIA+AF+L++ P G PIIVKKNLRVC+DCHSA+K ISKV  R IIVRD 
Sbjct: 675  LKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDI 734

Query: 722  SRFHHFGDGLCSCGDFW 772
            SRFHHF +G CSCGD+W
Sbjct: 735  SRFHHFSNGSCSCGDYW 751


>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Brachypodium distachyon]
          Length = 695

 Score =  370 bits (949), Expect = e-100
 Identities = 168/257 (65%), Positives = 210/257 (81%)
 Frame = +2

Query: 2    LVEEGLEYFNSMGKVYGVAPRPEHYSCVIDLLGRAGRLDQAEEFINKMPYEPNAFGWCSY 181
            LV+EGL+YF SM   +G+ P+ EHYSC+ID+ GRAGRLD+AE+FI +MP +PNA+GWCS 
Sbjct: 439  LVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSL 498

Query: 182  LGACRTYGDKERGELAAEKLMALEPENSGTHVLLSNIYASAGQWEGVRSMRKMMRDGKVT 361
            LGACR  G+KE GE+AA+ +M LEP+N+G HV LS IYAS GQWE V+++RK+MRD ++ 
Sbjct: 499  LGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIK 558

Query: 362  KLPGYSWVDVGNKTHAFGAEDYSHPQIREIYEKLENLLDQIRKAGYVPQTESIPFDMEEA 541
            KLPG+SWVD   KTH FG+ED+SHPQ  +IYEKLE L ++I++ GYVP T  +P ++E+ 
Sbjct: 559  KLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDT 618

Query: 542  QKERALHHHSERIAIAFALISMPAGKPIIVKKNLRVCADCHSAIKLISKVVGRKIIVRDN 721
             K+R L +HSERIA+AFALISMPA KPIIVKKNLR+CADCHSA+K ISKV  R IIVRDN
Sbjct: 619  AKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDN 678

Query: 722  SRFHHFGDGLCSCGDFW 772
            SRFHHF  G CSCGD+W
Sbjct: 679  SRFHHFVKGGCSCGDYW 695