BLASTX nr result

ID: Coptis23_contig00022105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022105
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, parti...   150   8e-35
emb|CAN62551.1| hypothetical protein VITISV_002308 [Vitis vinifera]   150   8e-35
ref|XP_002534162.1| acyltransferase, putative [Ricinus communis]...   148   4e-34
gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]         148   4e-34
ref|XP_002313455.1| beta-ketoacyl-coa synthase family protein [P...   147   9e-34

>ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, partial [Vitis vinifera]
          Length = 556

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/112 (66%), Positives = 87/112 (77%)
 Frame = -2

Query: 336 DHGRLGVRLGKNLPKAATRAFVDNLRDLAPKVLPLTELVRYAIVSFFQKEKGNGSNKKAP 157
           D GRLG  L K+LPKAATRAF+DNLR ++PK+LP+ EL+RY + S  +K      N K  
Sbjct: 350 DQGRLGFFLNKSLPKAATRAFIDNLRVISPKILPVRELLRYMVASLVRKMY---QNSKGG 406

Query: 156 GKAVINFRTGVDHFALHAGGTAVIDGIGKSLGLIEHDLEPARMTLHRFGNTS 1
           GK VINF+TGVDHF +H GG AVIDGIGKSL L E+DLEPARMTLHRFGNTS
Sbjct: 407 GKVVINFKTGVDHFCIHTGGKAVIDGIGKSLELTEYDLEPARMTLHRFGNTS 458


>emb|CAN62551.1| hypothetical protein VITISV_002308 [Vitis vinifera]
          Length = 467

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/112 (66%), Positives = 87/112 (77%)
 Frame = -2

Query: 336 DHGRLGVRLGKNLPKAATRAFVDNLRDLAPKVLPLTELVRYAIVSFFQKEKGNGSNKKAP 157
           D GRLG  L K+LPKAATRAF+DNLR ++PK+LP+ EL+RY + S  +K      N K  
Sbjct: 264 DQGRLGFFLNKSLPKAATRAFIDNLRVISPKILPVRELLRYMVASLVRKMY---QNSKGG 320

Query: 156 GKAVINFRTGVDHFALHAGGTAVIDGIGKSLGLIEHDLEPARMTLHRFGNTS 1
           GK VINF+TGVDHF +H GG AVIDGIGKSL L E+DLEPARMTLHRFGNTS
Sbjct: 321 GKVVINFKTGVDHFCIHTGGKAVIDGIGKSLELTEYDLEPARMTLHRFGNTS 372


>ref|XP_002534162.1| acyltransferase, putative [Ricinus communis]
           gi|223525766|gb|EEF28222.1| acyltransferase, putative
           [Ricinus communis]
          Length = 475

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/119 (63%), Positives = 92/119 (77%), Gaps = 7/119 (5%)
 Frame = -2

Query: 336 DHGRLGVRLGKNLPKAATRAFVDNLRDLAPKVLPLTELVRYAIVSFFQK-------EKGN 178
           D GR G  LGK+LPKAATRAFVDNLR+++PK+LP+ EL+R++I++F +K        KG 
Sbjct: 268 DQGRPGFHLGKSLPKAATRAFVDNLREISPKILPIRELLRFSIMTFIRKWSQSRNSGKGG 327

Query: 177 GSNKKAPGKAVINFRTGVDHFALHAGGTAVIDGIGKSLGLIEHDLEPARMTLHRFGNTS 1
           G+   AP + VIN RTGVDHF +H GG AVIDGIG +L L E+DLEPARMTLHRFGNTS
Sbjct: 328 GATTPAP-RPVINMRTGVDHFCIHTGGKAVIDGIGVNLDLSEYDLEPARMTLHRFGNTS 385


>gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum]
          Length = 466

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/114 (64%), Positives = 90/114 (78%), Gaps = 4/114 (3%)
 Frame = -2

Query: 330 GRLGVRLGKNLPKAATRAFVDNLRDLAPKVLPLTELVRYAIVSFFQKEKGNGSNK----K 163
           G++G  LGKNLPKAATR+FVDNLR + PK+LP+TELVR+ +VS  +K   +GS K    +
Sbjct: 266 GKVGFYLGKNLPKAATRSFVDNLRVITPKILPVTELVRFMVVSLVKKWNRHGSTKGTTTQ 325

Query: 162 APGKAVINFRTGVDHFALHAGGTAVIDGIGKSLGLIEHDLEPARMTLHRFGNTS 1
            P KA +NF++GVDHF +H GG AVIDGIG SL L E+DLEPARMTLHRFGNTS
Sbjct: 326 GPIKAGVNFKSGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTS 379


>ref|XP_002313455.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa]
           gi|222849863|gb|EEE87410.1| beta-ketoacyl-coa synthase
           family protein [Populus trichocarpa]
          Length = 461

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/113 (64%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = -2

Query: 336 DHGRLGVRLGKNLPKAATRAFVDNLRDLAPKVLPLTELVRYAIVSFFQKEKGNGSNKKAP 157
           + GRLG  LGK+LPKAATRA VDNLR++ PK+LP+ EL+R+ +VSF +K   + S K   
Sbjct: 264 EQGRLGFHLGKSLPKAATRALVDNLREITPKILPVRELLRFMVVSFIRKYWSHRSTKGVV 323

Query: 156 G-KAVINFRTGVDHFALHAGGTAVIDGIGKSLGLIEHDLEPARMTLHRFGNTS 1
             K VINF+TGVDHF +H GG AVIDGIG +L L E+DLEPARMTLHRFGNTS
Sbjct: 324 SPKPVINFKTGVDHFCIHTGGKAVIDGIGVNLDLTEYDLEPARMTLHRFGNTS 376


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