BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022102
         (1773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26594.3| unnamed protein product [Vitis vinifera]              730   0.0  
ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containi...   725   0.0  
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   724   0.0  
ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|2...   675   0.0  
ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containi...   659   0.0  

>emb|CBI26594.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  730 bits (1884), Expect = 0.0
 Identities = 366/524 (69%), Positives = 429/524 (81%), Gaps = 21/524 (4%)
 Frame = +3

Query: 18   MFRRYVKTALALNRSFS---------TTITKQLI------------PNNLKSGGKDTLGR 134
            MFR+ V TALA  R FS         TT+    I              N  S G+DTLGR
Sbjct: 1    MFRQRVHTALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNSTSSGRDTLGR 60

Query: 135  RLLSLIYPKRSAVITIRKWAEEGNPVGKYELNRIVRELRKLRRYKHALEICEWMKIQKDI 314
            RLLSL+Y KRSAVI I++W EEG+ V KYELNRIVRELRKL+RYKHALEICEWM  Q DI
Sbjct: 61   RLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDI 120

Query: 315  KLLPGDYAVHLDLVAKVRGLASAEKFFEDLPQQLRGQQTCTALLHTYAQNKLSDKAEALM 494
            KLL GDYAVHLDL+AK+RGLASAEKFFEDL  +++GQ TCTALLHTY QNK+S+KAEALM
Sbjct: 121  KLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALM 180

Query: 495  KKMSECGFLKYPLPYNHMLTLYIATGQMDKVPEVVKELKKNTSPDVVTFNLCLAVCASQN 674
            +KMSECGFLK PLPYNHM++LYI+ GQ++KVP +++ELKKNTSPDVVT+NL L VCASQN
Sbjct: 181  EKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQN 240

Query: 675  NVEGAEKYFLKLKKAKIDGDWVTYSTLTSLYIKNSLFDKARSTLKEMEKRASRKARVAYS 854
            +VE AEK  L++KKAKID DWVTYS+LT+LYIK  L DKA +TL EMEKR SRK R+AYS
Sbjct: 241  DVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYS 300

Query: 855  SLISLHTNMDDKDGVHRVWKKMNSIFGKMNDAEYTCMISSLVKLKEFEEAEKVYSEWETV 1034
            SLISLHTNM DKDGVHR+WKK+ SIF KMNDAEYTCMISSLVKL EFEEAE +YSEW +V
Sbjct: 301  SLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSV 360

Query: 1035 STTGDSRLSNLLLAAYINNDDMEKAESFYGRMVQKGIRPSYTTWELLTWGFLKLKQMDKV 1214
            S TGDSR+ N+LLAAYIN ++ME AE FY +MV++GI PSYTTWELLTWG+LK KQM+KV
Sbjct: 361  SPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKV 420

Query: 1215 LQYFQKAIESVGKWEPDDRIIREVFHNLSKQRDVEGAEKLLVILREAGHVTTEIYNALLR 1394
            L YF+KA+ SV KW PD++++REV+ NL +Q ++EGAEK+LVILR+AGHV+TEIYN LLR
Sbjct: 421  LDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLR 480

Query: 1395 TYEKAGKMPLIVAERMKKDTVDLNEETQELIKLTSKFCVADASS 1526
             Y KAGKMPLIVAE MKKD V+++EET  LIK TSK CV++ SS
Sbjct: 481  AYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCVSEVSS 524


>ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  725 bits (1871), Expect = 0.0
 Identities = 352/476 (73%), Positives = 413/476 (86%)
 Frame = +3

Query: 99   NLKSGGKDTLGRRLLSLIYPKRSAVITIRKWAEEGNPVGKYELNRIVRELRKLRRYKHAL 278
            N  S G+DTLGRRLLSL+Y KRSAVI I++W EEG+ V KYELNRIVRELRKL+RYKHAL
Sbjct: 162  NSTSSGRDTLGRRLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHAL 221

Query: 279  EICEWMKIQKDIKLLPGDYAVHLDLVAKVRGLASAEKFFEDLPQQLRGQQTCTALLHTYA 458
            EICEWM  Q DIKLL GDYAVHLDL+AK+RGLASAEKFFEDL  +++GQ TCTALLHTY 
Sbjct: 222  EICEWMTKQHDIKLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYV 281

Query: 459  QNKLSDKAEALMKKMSECGFLKYPLPYNHMLTLYIATGQMDKVPEVVKELKKNTSPDVVT 638
            QNK+S+KAEALM+KMSECGFLK PLPYNHM++LYI+ GQ++KVP +++ELKKNTSPDVVT
Sbjct: 282  QNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVT 341

Query: 639  FNLCLAVCASQNNVEGAEKYFLKLKKAKIDGDWVTYSTLTSLYIKNSLFDKARSTLKEME 818
            +NL L VCASQN+VE AEK  L++KKAKID DWVTYS+LT+LYIK  L DKA +TL EME
Sbjct: 342  YNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEME 401

Query: 819  KRASRKARVAYSSLISLHTNMDDKDGVHRVWKKMNSIFGKMNDAEYTCMISSLVKLKEFE 998
            KR SRK R+AYSSLISLHTNM DKDGVHR+WKK+ SIF KMNDAEYTCMISSLVKL EFE
Sbjct: 402  KRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFE 461

Query: 999  EAEKVYSEWETVSTTGDSRLSNLLLAAYINNDDMEKAESFYGRMVQKGIRPSYTTWELLT 1178
            EAE +YSEW +VS TGDSR+ N+LLAAYIN ++ME AE FY +MV++GI PSYTTWELLT
Sbjct: 462  EAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLT 521

Query: 1179 WGFLKLKQMDKVLQYFQKAIESVGKWEPDDRIIREVFHNLSKQRDVEGAEKLLVILREAG 1358
            WG+LK KQM+KVL YF+KA+ SV KW PD++++REV+ NL +Q ++EGAEK+LVILR+AG
Sbjct: 522  WGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAG 581

Query: 1359 HVTTEIYNALLRTYEKAGKMPLIVAERMKKDTVDLNEETQELIKLTSKFCVADASS 1526
            HV+TEIYN LLR Y KAGKMPLIVAE MKKD V+++EET  LIK TSK CV++ SS
Sbjct: 582  HVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCVSEVSS 637


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  724 bits (1869), Expect = 0.0
 Identities = 363/518 (70%), Positives = 424/518 (81%), Gaps = 21/518 (4%)
 Frame = +3

Query: 18   MFRRYVKTALALNRSFS---------TTITKQLI------------PNNLKSGGKDTLGR 134
            MFR+ V TALA  R FS         TT+    I              N  S G+DTLGR
Sbjct: 1    MFRQRVHTALAAVRHFSAEVATMKPLTTMKPMAIVKPKAVVKPKTSDGNSTSSGRDTLGR 60

Query: 135  RLLSLIYPKRSAVITIRKWAEEGNPVGKYELNRIVRELRKLRRYKHALEICEWMKIQKDI 314
            RLLSL+Y KRSAVI I++W EEG+ V KYELNRIVRELRKL+RYKHALEICEWM  Q DI
Sbjct: 61   RLLSLVYAKRSAVIAIQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDI 120

Query: 315  KLLPGDYAVHLDLVAKVRGLASAEKFFEDLPQQLRGQQTCTALLHTYAQNKLSDKAEALM 494
            KLL GDYAVHLDL+AK+RGLASAEKFFEDL  +++GQ TCTALLHTY QNK+S+KAEALM
Sbjct: 121  KLLAGDYAVHLDLIAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALM 180

Query: 495  KKMSECGFLKYPLPYNHMLTLYIATGQMDKVPEVVKELKKNTSPDVVTFNLCLAVCASQN 674
            +KMSECGFLK PLPYNHM++LYI+ GQ++KVP +++ELKKNTSPDVVT+NL L VCASQN
Sbjct: 181  EKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQN 240

Query: 675  NVEGAEKYFLKLKKAKIDGDWVTYSTLTSLYIKNSLFDKARSTLKEMEKRASRKARVAYS 854
            +VE AEK  L++KKAKID DWVTYS+LT+LYIK  L DKA +TL EMEKR SRK R+AYS
Sbjct: 241  DVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYS 300

Query: 855  SLISLHTNMDDKDGVHRVWKKMNSIFGKMNDAEYTCMISSLVKLKEFEEAEKVYSEWETV 1034
            SLISLHTNM DKDGVHR+WKK+ SIF KMNDAEYTCMISSLVKL EFEEAE +YSEW +V
Sbjct: 301  SLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSV 360

Query: 1035 STTGDSRLSNLLLAAYINNDDMEKAESFYGRMVQKGIRPSYTTWELLTWGFLKLKQMDKV 1214
            S TGDSR+ N+LLAAYIN ++ME AE FY +MV++GI PSYTTWELLTWG+LK KQM+KV
Sbjct: 361  SPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKV 420

Query: 1215 LQYFQKAIESVGKWEPDDRIIREVFHNLSKQRDVEGAEKLLVILREAGHVTTEIYNALLR 1394
            L YF+KA+ SV KW PD++++REV+ NL +Q ++EGAEK+LVILR+AGHV+TEIYN LLR
Sbjct: 421  LDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVSTEIYNWLLR 480

Query: 1395 TYEKAGKMPLIVAERMKKDTVDLNEETQELIKLTSKFC 1508
             Y KAGKMPLIVAE MKKD V+++EET  LIK TSK C
Sbjct: 481  AYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMC 518


>ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|222857027|gb|EEE94574.1|
            predicted protein [Populus trichocarpa]
          Length = 513

 Score =  675 bits (1741), Expect = 0.0
 Identities = 328/475 (69%), Positives = 396/475 (83%)
 Frame = +3

Query: 105  KSGGKDTLGRRLLSLIYPKRSAVITIRKWAEEGNPVGKYELNRIVRELRKLRRYKHALEI 284
            KSGG DTLGRRL SL+Y KRSAVITIRKW EEG+ V KYELNRIVRELRKL+RYKHALE+
Sbjct: 35   KSGGGDTLGRRLFSLVYGKRSAVITIRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEV 94

Query: 285  CEWMKIQKDIKLLPGDYAVHLDLVAKVRGLASAEKFFEDLPQQLRGQQTCTALLHTYAQN 464
            CEWM  Q DIKL+PGDYAVHLDL+AK+RGL SAEKFFED+P ++R  Q C+ALLH Y QN
Sbjct: 95   CEWMTKQSDIKLVPGDYAVHLDLIAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQN 154

Query: 465  KLSDKAEALMKKMSECGFLKYPLPYNHMLTLYIATGQMDKVPEVVKELKKNTSPDVVTFN 644
            K   KAEALM+KMSECGFLK  LPYNHML++Y+A GQ++KV E+++ELKK TSPDVVT+N
Sbjct: 155  KSISKAEALMEKMSECGFLKNALPYNHMLSVYVANGQLEKVAEIIQELKKKTSPDVVTYN 214

Query: 645  LCLAVCASQNNVEGAEKYFLKLKKAKIDGDWVTYSTLTSLYIKNSLFDKARSTLKEMEKR 824
            + L  CASQN+VE AEK F++LKK+K+D DWVTYSTLT+LYIK    +KA  TLKE+EKR
Sbjct: 215  MWLTACASQNDVETAEKVFMELKKSKLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKR 274

Query: 825  ASRKARVAYSSLISLHTNMDDKDGVHRVWKKMNSIFGKMNDAEYTCMISSLVKLKEFEEA 1004
            AS+K RV YSSL+SLH NM DKDG+HR W KM S+F KMNDAEY CMISSLVKL EF  A
Sbjct: 275  ASKKNRVTYSSLLSLHANMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGA 334

Query: 1005 EKVYSEWETVSTTGDSRLSNLLLAAYINNDDMEKAESFYGRMVQKGIRPSYTTWELLTWG 1184
            E +Y+EWE+VS T DSR+SN++LA+YIN + ME AE+F  RMVQKGI P YTTWELLT G
Sbjct: 335  ENLYNEWESVSATRDSRVSNIVLASYINRNQMEDAENFCQRMVQKGITPCYTTWELLTCG 394

Query: 1185 FLKLKQMDKVLQYFQKAIESVGKWEPDDRIIREVFHNLSKQRDVEGAEKLLVILREAGHV 1364
             LK +QM+KVL+ F+KA+ SV KW PD R+I ++F NL ++ D+EGAEKLLVILR+AGHV
Sbjct: 395  HLKTEQMEKVLENFKKALCSVRKWTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGHV 454

Query: 1365 TTEIYNALLRTYEKAGKMPLIVAERMKKDTVDLNEETQELIKLTSKFCVADASSV 1529
            +T IYN+LLRTY KAGKMP+I+ ERM+KD V+L++ET +LI+ TS  CV++ SS+
Sbjct: 455  STMIYNSLLRTYAKAGKMPVIIEERMQKDNVELDDETHKLIQTTSTMCVSEVSSL 509


>ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Glycine max]
          Length = 516

 Score =  659 bits (1700), Expect = 0.0
 Identities = 327/505 (64%), Positives = 398/505 (78%), Gaps = 2/505 (0%)
 Frame = +3

Query: 27   RYVKTALALNRSFSTTITKQL-IPNNLKSGGKDTLGRRLLSLIYPKRSAVITIRKWAEEG 203
            R V T LA+ R FS +   ++       SGG DTLGRRLLSL+YPKRSAV+ I KW EEG
Sbjct: 12   RSVGTYLAVVRHFSASAEARVGSAAASSSGGGDTLGRRLLSLVYPKRSAVVAINKWKEEG 71

Query: 204  N-PVGKYELNRIVRELRKLRRYKHALEICEWMKIQKDIKLLPGDYAVHLDLVAKVRGLAS 380
            + P  KY+LNRIVRELRK +RYKHALE+CEWM +QKD+KL+ GDYAVHLDL+ KVRGL S
Sbjct: 72   HEPPRKYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGDYAVHLDLITKVRGLNS 131

Query: 381  AEKFFEDLPQQLRGQQTCTALLHTYAQNKLSDKAEALMKKMSECGFLKYPLPYNHMLTLY 560
            AEKFFEDLP ++RG+QTC+ALLH Y QN L DKAEALM KMSEC  L  PLPYNHM++LY
Sbjct: 132  AEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDLLINPLPYNHMISLY 191

Query: 561  IATGQMDKVPEVVKELKKNTSPDVVTFNLCLAVCASQNNVEGAEKYFLKLKKAKIDGDWV 740
            I+ G+++KVP++++ELK NTSPD+VTFNL LA CASQN+VE AE+  L+LKKAKID DWV
Sbjct: 192  ISNGKLEKVPKIIQELKMNTSPDIVTFNLWLAACASQNDVETAERVLLELKKAKIDPDWV 251

Query: 741  TYSTLTSLYIKNSLFDKARSTLKEMEKRASRKARVAYSSLISLHTNMDDKDGVHRVWKKM 920
            TYSTLT+LYIKN+  +KA +T+KEME R SRK RVAYSSL+SLHTNM +KD V+R+W+KM
Sbjct: 252  TYSTLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKM 311

Query: 921  NSIFGKMNDAEYTCMISSLVKLKEFEEAEKVYSEWETVSTTGDSRLSNLLLAAYINNDDM 1100
             + F KMND EY CMISSL+KL +F  AE +Y EWE+VS T D R+SN+LL +YIN D M
Sbjct: 312  KASFRKMNDNEYICMISSLLKLGDFAGAEDLYREWESVSGTNDVRVSNILLGSYINQDQM 371

Query: 1101 EKAESFYGRMVQKGIRPSYTTWELLTWGFLKLKQMDKVLQYFQKAIESVGKWEPDDRIIR 1280
            E AE F  ++VQKG+ P YTTWEL TWG+LK K ++K L YF KAI SV KW PD R+++
Sbjct: 372  EMAEDFCNQIVQKGVIPCYTTWELFTWGYLKRKDVEKFLDYFSKAISSVTKWSPDQRLVQ 431

Query: 1281 EVFHNLSKQRDVEGAEKLLVILREAGHVTTEIYNALLRTYEKAGKMPLIVAERMKKDTVD 1460
            E F  + +Q   +GAE+LLVILR AGHV T IYN  L+TY  AGKMP+IVAERM+KD V 
Sbjct: 432  EAFKIIEEQAHTKGAEQLLVILRNAGHVNTNIYNLFLKTYATAGKMPMIVAERMRKDNVK 491

Query: 1461 LNEETQELIKLTSKFCVADASSVLS 1535
            L+EET+ L+ LTSK CV+D S +LS
Sbjct: 492  LDEETRRLLDLTSKMCVSDVSRILS 516