BLASTX nr result
ID: Coptis23_contig00022094
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00022094 (876 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicag... 62 2e-07 ref|XP_003602349.1| FHA domain-containing protein [Medicago trun... 60 5e-07 ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|2... 59 1e-06 emb|CAN78025.1| hypothetical protein VITISV_031335 [Vitis vinifera] 57 7e-06 >ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicago truncatula] gi|355522944|gb|AET03398.1| Pleiotropic drug resistance protein [Medicago truncatula] Length = 817 Score = 62.0 bits (149), Expect = 2e-07 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 10/108 (9%) Frame = -3 Query: 637 DKESKSPKDLQGESSQCAPAFESEAQKK---------GKTLDELKSIPDVNR-KLMPKLD 488 D+E K LQ E C E + ++K GK + + K ++N + P D Sbjct: 404 DEEDKEKDKLQEE---CVGDEEDKEKEKSQECVGDGVGKKIYDAKEKENLNGDENWP--D 458 Query: 487 LEKMTLGEYFDYLEVFLPKQIREDNEKICASMREQAKKFKQFMIEQQN 344 LEKM LGE+FD+LEV+LPKQI ++ E+I SM ++A++ ++++I QN Sbjct: 459 LEKMNLGEWFDFLEVYLPKQIHDETEEIIDSMTQKAERLREYVIMYQN 506 >ref|XP_003602349.1| FHA domain-containing protein [Medicago truncatula] gi|355491397|gb|AES72600.1| FHA domain-containing protein [Medicago truncatula] Length = 433 Score = 60.5 bits (145), Expect = 5e-07 Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 11/112 (9%) Frame = -3 Query: 640 DDKESKSPKDLQGESSQCAPAFESEAQKKGKTL----DELKSIPDVNRKL-------MPK 494 DD E K + LQ E C E + ++K + + K DVN K P Sbjct: 320 DDGEDKKKEKLQEE---CVAGEEDKEKEKSQEECVGDGDGKENCDVNEKENLIGDENWP- 375 Query: 493 LDLEKMTLGEYFDYLEVFLPKQIREDNEKICASMREQAKKFKQFMIEQQNVQ 338 DLEK++LGE+FD+LEV LPKQI ++ ++I SMR++A+ ++++I QN Q Sbjct: 376 -DLEKISLGEWFDFLEVCLPKQIHDETKEIIDSMRQKAEGLREYVIMYQNQQ 426 >ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|222864763|gb|EEF01894.1| predicted protein [Populus trichocarpa] Length = 383 Score = 59.3 bits (142), Expect = 1e-06 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 19/152 (12%) Frame = -3 Query: 736 RGRRGRPRKVIVSKNEGLESDSVAVSG-----------MQILGDDKESKSPKDLQGESSQ 590 RG RGR + + V E ++ D V V ++ + ++K+ ++ +D+ E ++ Sbjct: 226 RGGRGRKKNLQVVPAENVQCDVVDVKENVDLAMNAQEEVKEVANEKKVETVEDVHKEITE 285 Query: 589 CAPAFESEAQKKGKTLD-------ELKSIPDVNRKLMPKL-DLEKMTLGEYFDYLEVFLP 434 +F + K D E + + N + +L DLEKMTL E+F+ +EV LP Sbjct: 286 KETSFGEKCNDTAKGNDAKDGDVSEAQVSANENLEKGKELPDLEKMTLEEWFNSMEVDLP 345 Query: 433 KQIREDNEKICASMREQAKKFKQFMIEQQNVQ 338 KQI E E++ MR +A++ +++MIEQ+ Q Sbjct: 346 KQILEVTEEMVEGMRRKAERVREYMIEQKKKQ 377 >emb|CAN78025.1| hypothetical protein VITISV_031335 [Vitis vinifera] Length = 1861 Score = 56.6 bits (135), Expect = 7e-06 Identities = 24/49 (48%), Positives = 39/49 (79%) Frame = -3 Query: 490 DLEKMTLGEYFDYLEVFLPKQIREDNEKICASMREQAKKFKQFMIEQQN 344 DLEKMTLG++FD++E+ LPKQI + E++ A MRE ++ ++ M++Q+N Sbjct: 1797 DLEKMTLGDWFDFVELHLPKQIYDVIEEMIAGMRESGERVREHMLQQKN 1845