BLASTX nr result

ID: Coptis23_contig00022094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022094
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicag...    62   2e-07
ref|XP_003602349.1| FHA domain-containing protein [Medicago trun...    60   5e-07
ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
emb|CAN78025.1| hypothetical protein VITISV_031335 [Vitis vinifera]    57   7e-06

>ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicago truncatula]
           gi|355522944|gb|AET03398.1| Pleiotropic drug resistance
           protein [Medicago truncatula]
          Length = 817

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
 Frame = -3

Query: 637 DKESKSPKDLQGESSQCAPAFESEAQKK---------GKTLDELKSIPDVNR-KLMPKLD 488
           D+E K    LQ E   C    E + ++K         GK + + K   ++N  +  P  D
Sbjct: 404 DEEDKEKDKLQEE---CVGDEEDKEKEKSQECVGDGVGKKIYDAKEKENLNGDENWP--D 458

Query: 487 LEKMTLGEYFDYLEVFLPKQIREDNEKICASMREQAKKFKQFMIEQQN 344
           LEKM LGE+FD+LEV+LPKQI ++ E+I  SM ++A++ ++++I  QN
Sbjct: 459 LEKMNLGEWFDFLEVYLPKQIHDETEEIIDSMTQKAERLREYVIMYQN 506


>ref|XP_003602349.1| FHA domain-containing protein [Medicago truncatula]
           gi|355491397|gb|AES72600.1| FHA domain-containing
           protein [Medicago truncatula]
          Length = 433

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
 Frame = -3

Query: 640 DDKESKSPKDLQGESSQCAPAFESEAQKKGKTL----DELKSIPDVNRKL-------MPK 494
           DD E K  + LQ E   C    E + ++K +       + K   DVN K         P 
Sbjct: 320 DDGEDKKKEKLQEE---CVAGEEDKEKEKSQEECVGDGDGKENCDVNEKENLIGDENWP- 375

Query: 493 LDLEKMTLGEYFDYLEVFLPKQIREDNEKICASMREQAKKFKQFMIEQQNVQ 338
            DLEK++LGE+FD+LEV LPKQI ++ ++I  SMR++A+  ++++I  QN Q
Sbjct: 376 -DLEKISLGEWFDFLEVCLPKQIHDETKEIIDSMRQKAEGLREYVIMYQNQQ 426


>ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|222864763|gb|EEF01894.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 19/152 (12%)
 Frame = -3

Query: 736 RGRRGRPRKVIVSKNEGLESDSVAVSG-----------MQILGDDKESKSPKDLQGESSQ 590
           RG RGR + + V   E ++ D V V             ++ + ++K+ ++ +D+  E ++
Sbjct: 226 RGGRGRKKNLQVVPAENVQCDVVDVKENVDLAMNAQEEVKEVANEKKVETVEDVHKEITE 285

Query: 589 CAPAFESEAQKKGKTLD-------ELKSIPDVNRKLMPKL-DLEKMTLGEYFDYLEVFLP 434
              +F  +     K  D       E +   + N +   +L DLEKMTL E+F+ +EV LP
Sbjct: 286 KETSFGEKCNDTAKGNDAKDGDVSEAQVSANENLEKGKELPDLEKMTLEEWFNSMEVDLP 345

Query: 433 KQIREDNEKICASMREQAKKFKQFMIEQQNVQ 338
           KQI E  E++   MR +A++ +++MIEQ+  Q
Sbjct: 346 KQILEVTEEMVEGMRRKAERVREYMIEQKKKQ 377


>emb|CAN78025.1| hypothetical protein VITISV_031335 [Vitis vinifera]
          Length = 1861

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/49 (48%), Positives = 39/49 (79%)
 Frame = -3

Query: 490  DLEKMTLGEYFDYLEVFLPKQIREDNEKICASMREQAKKFKQFMIEQQN 344
            DLEKMTLG++FD++E+ LPKQI +  E++ A MRE  ++ ++ M++Q+N
Sbjct: 1797 DLEKMTLGDWFDFVELHLPKQIYDVIEEMIAGMRESGERVREHMLQQKN 1845


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