BLASTX nr result

ID: Coptis23_contig00022092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022092
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530965.1| conserved hypothetical protein [Ricinus comm...    60   5e-14
ref|XP_002319207.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-12
ref|XP_002525599.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_002298322.1| predicted protein [Populus trichocarpa] gi|2...    72   7e-11
ref|XP_002266794.2| PREDICTED: uncharacterized protein LOC100248...    71   1e-10

>ref|XP_002530965.1| conserved hypothetical protein [Ricinus communis]
           gi|223529480|gb|EEF31437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1204

 Score = 59.7 bits (143), Expect(2) = 5e-14
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = +2

Query: 2   FDIPYDPQEEKPNLTEDSFHQEFMSVFQKDMYLSRHESFSLGPSFMG 142
           FDIPYD  EEKP+L  DSF QEF +   K+ +  RHESF++G S +G
Sbjct: 461 FDIPYDSNEEKPDLKGDSFQQEFSAFHHKEPFFRRHESFNVGSSILG 507



 Score = 43.1 bits (100), Expect(2) = 5e-14
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
 Frame = +3

Query: 141 GGLKQERNNTKFDPYYAAE--ASLQTEYSRLHGKLGEKVISGLXXXXXXXXXXXXTEREI 314
           G +KQER + ++ PY+  E  A+ +T Y     +L E   S L             E E 
Sbjct: 507 GAVKQERQDLRWKPYFVPERFATEETSYRAFQRQLSEASESKLSSVPDTESVSSAVEEED 566

Query: 315 YMAQTEQIFSQGALISQTHHNFDLIEQERKSSTEVDLMKSGEEAKGDADLNKVEI 479
                E  F +  +IS   H   L+++   SS +VD +  G   + DA  ++ EI
Sbjct: 567 KKLNEEDDFIETEMISSVEHASVLVQRGSLSSEDVDPLDIGNIEERDAHHDEDEI 621


>ref|XP_002319207.1| predicted protein [Populus trichocarpa] gi|222857583|gb|EEE95130.1|
           predicted protein [Populus trichocarpa]
          Length = 1661

 Score = 63.2 bits (152), Expect(2) = 7e-12
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = +2

Query: 2   FDIPYDPQEEKPNLTEDSFHQEFMSVFQKDMYLSRHESFSLGPSFMGGT 148
           FD+PYD  EEKP+L  DSF QEF +   ++ +  RHESFS+GPS + GT
Sbjct: 452 FDLPYDSNEEKPDLKGDSFQQEFSATQHREPFFRRHESFSIGPSTLAGT 500



 Score = 32.3 bits (72), Expect(2) = 7e-12
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
 Frame = +3

Query: 159 RNNTKFDPYYAAE--ASLQTEYSRLHGKLGEKVISGLXXXXXXXXXXXXTEREIYMAQTE 332
           R++ ++ PY+  E  A+  T Y     +L E   S +             E E      E
Sbjct: 501 RHDLRWKPYFVPERFATEGTSYHTFQRQLSEASESKVSSVPDTESVSSALEEEDKRINEE 560

Query: 333 QIFSQGALISQTHHNFDLIEQERKSSTEVDLMKSGEEAKGD 455
            +  +  +IS   H   L+E+   SS EVD ++  +  K D
Sbjct: 561 DVSQETEMISNVDHASLLVERGSLSSEEVDSVEDEQVEKSD 601


>ref|XP_002525599.1| conserved hypothetical protein [Ricinus communis]
           gi|223535035|gb|EEF36717.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1271

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = +2

Query: 2   FDIPYDPQEEKPNLTEDSFHQEFMSVFQKDMYLSRHESFSLGPSF 136
           FD+PYDP EEKPNL  DSF QEFM  FQK+M+  RHESF+ GPSF
Sbjct: 315 FDLPYDPLEEKPNLMADSFQQEFMPAFQKEMFFCRHESFTWGPSF 359


>ref|XP_002298322.1| predicted protein [Populus trichocarpa] gi|222845580|gb|EEE83127.1|
           predicted protein [Populus trichocarpa]
          Length = 1462

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 34/56 (60%), Positives = 40/56 (71%)
 Frame = +2

Query: 2   FDIPYDPQEEKPNLTEDSFHQEFMSVFQKDMYLSRHESFSLGPSFMGGT*AREKQH 169
           FD+PYDP EEKPNL  DSFH+EFM+V QK+    RHE+FSLG SF      R+ QH
Sbjct: 311 FDLPYDPHEEKPNLMADSFHEEFMAVHQKEFPFCRHENFSLGNSFQDN---RQGQH 363


>ref|XP_002266794.2| PREDICTED: uncharacterized protein LOC100248405 [Vitis vinifera]
          Length = 1864

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/56 (62%), Positives = 39/56 (69%)
 Frame = +2

Query: 2   FDIPYDPQEEKPNLTEDSFHQEFMSVFQKDMYLSRHESFSLGPSFMGGT*AREKQH 169
           FD+PYD  EEKP+L  DSF QEFM+  QKDM   RHESFSLG S  GG    E+QH
Sbjct: 422 FDLPYDSSEEKPDLKGDSFEQEFMAFHQKDMLFRRHESFSLGASSFGGP-RHERQH 476


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