BLASTX nr result

ID: Coptis23_contig00022090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022090
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272995.1| PREDICTED: leucoanthocyanidin dioxygenase [V...   220   1e-55
ref|XP_002323582.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
gb|AFK44122.1| unknown [Lotus japonicus]                              213   1e-53
ref|XP_003616646.1| 1-aminocyclopropane-1-carboxylate oxidase [M...   212   4e-53
ref|XP_004149230.1| PREDICTED: LOW QUALITY PROTEIN: probable 2-o...   211   5e-53

>ref|XP_002272995.1| PREDICTED: leucoanthocyanidin dioxygenase [Vitis vinifera]
           gi|147769193|emb|CAN59837.1| hypothetical protein
           VITISV_039830 [Vitis vinifera]
           gi|297736599|emb|CBI25470.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  220 bits (560), Expect = 1e-55
 Identities = 104/133 (78%), Positives = 118/133 (88%)
 Frame = +2

Query: 2   LGLSSHSDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKS 181
           LGLSSHSDPGGMT LLPDH V GLQVRK  KW+TV+PAP AFIVNIGDQIQVLSNAIYKS
Sbjct: 227 LGLSSHSDPGGMTFLLPDHDVPGLQVRKDHKWITVKPAPHAFIVNIGDQIQVLSNAIYKS 286

Query: 182 IEHRAIVNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGP 361
           +EHR +VN +KER+S+AFFYNPKSD+L+EP + LVTPD PA Y  MTFD+YR+YIR RGP
Sbjct: 287 VEHRVMVNSLKERVSLAFFYNPKSDILIEPVKALVTPDTPALYPGMTFDQYRLYIRMRGP 346

Query: 362 QGKSQMESLKSPR 400
           +GKSQ+ESLKSPR
Sbjct: 347 RGKSQVESLKSPR 359


>ref|XP_002323582.1| predicted protein [Populus trichocarpa] gi|222868212|gb|EEF05343.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  215 bits (548), Expect = 3e-54
 Identities = 101/132 (76%), Positives = 120/132 (90%)
 Frame = +2

Query: 2   LGLSSHSDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKS 181
           LGLS HSDPGGMT+LLPD +V+GLQVR+ D WVTV+PAP+AFI+NIGDQIQVLSNAIY+S
Sbjct: 230 LGLSPHSDPGGMTILLPDENVAGLQVRRKDSWVTVKPAPNAFIINIGDQIQVLSNAIYQS 289

Query: 182 IEHRAIVNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGP 361
           +EHR IVN  K+R+S+AFFYNPKSDLL+EP++ELVT D+PA Y PMTFDEYR+YIRT+GP
Sbjct: 290 VEHRVIVNSNKDRVSLAFFYNPKSDLLIEPSKELVTVDRPALYPPMTFDEYRLYIRTKGP 349

Query: 362 QGKSQMESLKSP 397
            GK Q+ESLKSP
Sbjct: 350 CGKKQVESLKSP 361


>gb|AFK44122.1| unknown [Lotus japonicus]
          Length = 367

 Score =  213 bits (543), Expect = 1e-53
 Identities = 102/133 (76%), Positives = 116/133 (87%)
 Frame = +2

Query: 2   LGLSSHSDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKS 181
           LGLSSHSDPGGMT+LLPD  V GLQVRKGD W+TV PA  AFIVNIGDQIQVLSNAIY S
Sbjct: 235 LGLSSHSDPGGMTMLLPDDQVRGLQVRKGDDWITVNPARHAFIVNIGDQIQVLSNAIYTS 294

Query: 182 IEHRAIVNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGP 361
           +EHR IVN  KER+S+AFFYNPKSD+ +EP +ELVTPD+PA Y  MTFDEYR++IR RGP
Sbjct: 295 VEHRVIVNSDKERVSLAFFYNPKSDIPIEPVKELVTPDKPALYPAMTFDEYRLFIRMRGP 354

Query: 362 QGKSQMESLKSPR 400
           +GKSQ+ES+KSPR
Sbjct: 355 RGKSQVESMKSPR 367


>ref|XP_003616646.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula]
           gi|355517981|gb|AES99604.1|
           1-aminocyclopropane-1-carboxylate oxidase [Medicago
           truncatula]
          Length = 358

 Score =  212 bits (539), Expect = 4e-53
 Identities = 101/133 (75%), Positives = 116/133 (87%)
 Frame = +2

Query: 2   LGLSSHSDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKS 181
           LGLSSHSDPGGMTLLLPD  + GLQVRKGD W+TV+P  +AFIVNIGDQIQVLSNAIY+S
Sbjct: 226 LGLSSHSDPGGMTLLLPDDQIHGLQVRKGDNWITVKPVRNAFIVNIGDQIQVLSNAIYRS 285

Query: 182 IEHRAIVNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGP 361
           +EHR I N  KER+S+AFFYNPKSD+ +EPA+ELV PD+PA Y  MTFDEYR++IR RGP
Sbjct: 286 VEHRVIANSHKERVSLAFFYNPKSDIPIEPAKELVKPDKPALYPAMTFDEYRLFIRMRGP 345

Query: 362 QGKSQMESLKSPR 400
            GKSQ+ESLKSPR
Sbjct: 346 CGKSQVESLKSPR 358


>ref|XP_004149230.1| PREDICTED: LOW QUALITY PROTEIN: probable
           2-oxoglutarate/Fe(II)-dependent dioxygenase-like
           [Cucumis sativus]
          Length = 350

 Score =  211 bits (538), Expect = 5e-53
 Identities = 98/133 (73%), Positives = 118/133 (88%)
 Frame = +2

Query: 2   LGLSSHSDPGGMTLLLPDHSVSGLQVRKGDKWVTVQPAPDAFIVNIGDQIQVLSNAIYKS 181
           LGLSSHSDPGG+T LLPD  V+GLQVRK +KW+TV+PA  A IVN+GDQ+QVLSNAIYKS
Sbjct: 218 LGLSSHSDPGGLTFLLPDDKVAGLQVRKDEKWITVKPAAHAIIVNVGDQVQVLSNAIYKS 277

Query: 182 IEHRAIVNPVKERISIAFFYNPKSDLLLEPARELVTPDQPAQYLPMTFDEYRVYIRTRGP 361
           +EHR IVN  KER+S+AFFYNPKSD+ +EPA+ L+T D+PA Y PMTFDEYR++IRTRGP
Sbjct: 278 VEHRVIVNSDKERVSLAFFYNPKSDIPIEPAKALITQDRPALYPPMTFDEYRLFIRTRGP 337

Query: 362 QGKSQMESLKSPR 400
           QGKSQ+++LKSPR
Sbjct: 338 QGKSQVDALKSPR 350


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