BLASTX nr result

ID: Coptis23_contig00022086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022086
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM89632.1| nuclear transcription factor Y-alpha [Populus eup...    79   1e-18
ref|XP_002528664.1| ccaat-binding transcription factor subunit A...    80   2e-17
ref|XP_003524282.1| PREDICTED: nuclear transcription factor Y su...    84   2e-14
ref|XP_004149164.1| PREDICTED: nuclear transcription factor Y su...    74   6e-14
ref|XP_003532849.1| PREDICTED: uncharacterized protein LOC100797...    80   3e-13

>gb|ADM89632.1| nuclear transcription factor Y-alpha [Populus euphratica]
          Length = 223

 Score = 79.0 bits (193), Expect(2) = 1e-18
 Identities = 41/51 (80%), Positives = 44/51 (86%), Gaps = 5/51 (9%)
 Frame = +1

Query: 1   KTINGDDLLWAMTTLGFENYVGSLKGYLNKYRETE----AMARQGDH-SPT 138
           KTINGDDLLWAM+TLGFENYVGSLK YLNKYR+TE    +MARQ DH SPT
Sbjct: 84  KTINGDDLLWAMSTLGFENYVGSLKVYLNKYRDTEGEKNSMARQEDHLSPT 134



 Score = 39.3 bits (90), Expect(2) = 1e-18
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +2

Query: 221 LPDFNSGFFSLGATGVPYSFGDQERVMACGEKSKINGAFYVSTTYENGNALANKVIGANH 400
           L  FN+G +SLG      S+G   R +   E S + G F ++   ++G+   N  +    
Sbjct: 159 LQSFNAGLYSLGTEVTAKSYGQNTRFLGYQESSMV-GDFNMNKIRDHGDRNGNIAMAGQL 217

Query: 401 HNGAGW 418
           H+G GW
Sbjct: 218 HHGVGW 223


>ref|XP_002528664.1| ccaat-binding transcription factor subunit A, putative [Ricinus
           communis] gi|223531887|gb|EEF33703.1| ccaat-binding
           transcription factor subunit A, putative [Ricinus
           communis]
          Length = 220

 Score = 80.5 bits (197), Expect(2) = 2e-17
 Identities = 40/58 (68%), Positives = 44/58 (75%), Gaps = 4/58 (6%)
 Frame = +1

Query: 1   KTINGDDLLWAMTTLGFENYVGSLKGYLNKYRETE----AMARQGDHSPTEETQTNNI 162
           KTINGDDLLWAMTTLGFENYVG LK YLNKYRETE    +MAR  + SP   T+ N +
Sbjct: 80  KTINGDDLLWAMTTLGFENYVGPLKVYLNKYRETEGEKNSMARHDEQSPPPTTEINKL 137



 Score = 33.5 bits (75), Expect(2) = 2e-17
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +2

Query: 188 TNHYGNIVNAKLPDFN--SGFFSLGATGVPYSFGDQ-ERVMACGEKSKIN-GAFYVSTTY 355
           T+H+    + ++  FN  +GF+SLG+     S+GD   R +  GE      G F  +   
Sbjct: 144 TDHH----HVEVQGFNCTTGFYSLGSQVTNKSYGDNYTRSVGYGENLVSGAGGFNFNKIR 199

Query: 356 ENGNALANKVIGANHHNGAGW 418
            NG+   N+ + A  H+G  W
Sbjct: 200 GNGDGNGNRAVAAQLHHGVEW 220


>ref|XP_003524282.1| PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine
           max]
          Length = 225

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 4/59 (6%)
 Frame = +1

Query: 1   KTINGDDLLWAMTTLGFENYVGSLKGYLNKYRETE----AMARQGDHSPTEETQTNNIM 165
           KTINGDDLLWAMTTLGFENYVG LK YLN YRETE    +MA+Q +HSPT +T  + ++
Sbjct: 86  KTINGDDLLWAMTTLGFENYVGPLKFYLNNYRETEGEKSSMAKQEEHSPTHQTNIDGVV 144


>ref|XP_004149164.1| PREDICTED: nuclear transcription factor Y subunit B-like [Cucumis
           sativus] gi|449529882|ref|XP_004171927.1| PREDICTED:
           nuclear transcription factor Y subunit B-like [Cucumis
           sativus]
          Length = 225

 Score = 74.3 bits (181), Expect(2) = 6e-14
 Identities = 38/48 (79%), Positives = 40/48 (83%), Gaps = 4/48 (8%)
 Frame = +1

Query: 1   KTINGDDLLWAMTTLGFENYVGSLKGYLNKYRETE----AMARQGDHS 132
           KTINGDDLLWAMTTLGFENYVG LK YLNKYRETE    ++ARQ D S
Sbjct: 90  KTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQEDPS 137



 Score = 28.1 bits (61), Expect(2) = 6e-14
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +2

Query: 227 DFNSGFFSLG----ATGVPYSFGDQERVMACGEKSKINGAFYVSTTYENGNALANKVIGA 394
           +FNSGF+SLG      G   SF   + V   GE  +    F ++  +ENG     + + A
Sbjct: 162 NFNSGFYSLGNQIQNQGNQKSFNIIDGV-GFGENLR---GFNINGVHENGEGNRARAMAA 217

Query: 395 NHHNGAGW 418
           +    +GW
Sbjct: 218 HLQQSSGW 225


>ref|XP_003532849.1| PREDICTED: uncharacterized protein LOC100797721 [Glycine max]
          Length = 236

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 42/59 (71%), Positives = 46/59 (77%), Gaps = 7/59 (11%)
 Frame = +1

Query: 1   KTINGDDLLWAMTTLGFENYVGSLKGYLNKYRETE------AMARQGD-HSPTEETQTN 156
           KTINGDDLLWAMTTLGFENYVG LK YLN YRETE      +MA+Q + HSPT + QTN
Sbjct: 87  KTINGDDLLWAMTTLGFENYVGPLKLYLNNYRETEGEKSSTSMAKQEELHSPTHQHQTN 145


Top