BLASTX nr result

ID: Coptis23_contig00022083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022083
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...    70   1e-10
ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...    70   1e-10
ref|XP_002528079.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-conta...    66   3e-09
emb|CBI33620.3| unnamed protein product [Vitis vinifera]               66   3e-09

>ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
            repeat-containing protein KIAA1468 homolog [Cucumis
            sativus]
          Length = 1190

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -1

Query: 253  GKRESGDPLPSESVETPKPDLPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDA 98
            GK+ES +P PSE VE P P  P P EDTRFRRIMRG+F +MLRGK K  E++
Sbjct: 1136 GKKESLEPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEES 1187


>ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
            repeat-containing protein KIAA1468 homolog [Cucumis
            sativus]
          Length = 1249

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -1

Query: 253  GKRESGDPLPSESVETPKPDLPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDA 98
            GK+ES +P PSE VE P P  P P EDTRFRRIMRG+F +MLRGK K  E++
Sbjct: 1195 GKKESLEPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEES 1246


>ref|XP_002528079.1| conserved hypothetical protein [Ricinus communis]
            gi|223532540|gb|EEF34329.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1167

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = -1

Query: 253  GKRESGDPLPSESVETPKPDLPAPVEDTRFRRIMRGNFGEMLRGKGKGNE 104
            GK+E+ DPLP +  E+PKP LP   EDTRFRRIMRGNF +MLRGK + N+
Sbjct: 1119 GKKEAADPLPQDP-ESPKPVLPPAAEDTRFRRIMRGNFTDMLRGKTQPNQ 1167


>ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468
            homolog [Vitis vinifera]
          Length = 1184

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/56 (58%), Positives = 38/56 (67%)
 Frame = -1

Query: 253  GKRESGDPLPSESVETPKPDLPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDAPKEQ 86
            GK++SGDP P E VE+P+   P P EDTRF RIMRGNF +MLR K K  ED    Q
Sbjct: 1130 GKKDSGDP-PPEPVESPRAVPPPPAEDTRFMRIMRGNFTDMLRSKAKNQEDTSTGQ 1184


>emb|CBI33620.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -1

Query: 253 GKRESGDPLPSESVETPKPDLPAPVEDTRFRRIMRGNFGEMLRGKGKGNED 101
           GK++SGDP P E VE+P+   P P EDTRF RIMRGNF +MLR K K  ED
Sbjct: 101 GKKDSGDP-PPEPVESPRAVPPPPAEDTRFMRIMRGNFTDMLRSKAKNQED 150


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