BLASTX nr result

ID: Coptis23_contig00022082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022082
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...    68   7e-10
ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...    68   7e-10
ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-conta...    64   1e-08
emb|CBI33620.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002528079.1| conserved hypothetical protein [Ricinus comm...    62   6e-08

>ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
            repeat-containing protein KIAA1468 homolog [Cucumis
            sativus]
          Length = 1190

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = -1

Query: 293  GKRESGDSLPSESVETPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDA 138
            GK+ES +  PSE VE P P  P P EDTRFRRIMRG+F +MLRGK K  E++
Sbjct: 1136 GKKESLEPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEES 1187


>ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
            repeat-containing protein KIAA1468 homolog [Cucumis
            sativus]
          Length = 1249

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = -1

Query: 293  GKRESGDSLPSESVETPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDA 138
            GK+ES +  PSE VE P P  P P EDTRFRRIMRG+F +MLRGK K  E++
Sbjct: 1195 GKKESLEPTPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQEES 1246


>ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468
            homolog [Vitis vinifera]
          Length = 1184

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/56 (57%), Positives = 37/56 (66%)
 Frame = -1

Query: 293  GKRESGDSLPSESVETPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNEDAPKEQ 126
            GK++SGD  P E VE+P+   P P EDTRF RIMRGNF +MLR K K  ED    Q
Sbjct: 1130 GKKDSGDP-PPEPVESPRAVPPPPAEDTRFMRIMRGNFTDMLRSKAKNQEDTSTGQ 1184


>emb|CBI33620.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = -1

Query: 293 GKRESGDSLPSESVETPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNED 141
           GK++SGD  P E VE+P+   P P EDTRF RIMRGNF +MLR K K  ED
Sbjct: 101 GKKDSGDP-PPEPVESPRAVPPPPAEDTRFMRIMRGNFTDMLRSKAKNQED 150


>ref|XP_002528079.1| conserved hypothetical protein [Ricinus communis]
            gi|223532540|gb|EEF34329.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1167

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -1

Query: 293  GKRESGDSLPSESVETPKPDSPAPVEDTRFRRIMRGNFGEMLRGKGKGNE 144
            GK+E+ D LP +  E+PKP  P   EDTRFRRIMRGNF +MLRGK + N+
Sbjct: 1119 GKKEAADPLPQDP-ESPKPVLPPAAEDTRFRRIMRGNFTDMLRGKTQPNQ 1167


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