BLASTX nr result

ID: Coptis23_contig00022071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022071
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274434.2| PREDICTED: probable LRR receptor-like serine...   148   5e-34
ref|XP_003557009.1| PREDICTED: probable LRR receptor-like serine...   146   1e-33
ref|XP_002274094.2| PREDICTED: probable LRR receptor-like serine...   146   2e-33
emb|CBI36565.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_003545194.1| PREDICTED: probable LRR receptor-like serine...   145   3e-33

>ref|XP_002274434.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Vitis vinifera]
          Length = 972

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/163 (44%), Positives = 101/163 (61%)
 Frame = +3

Query: 3    NNKGLCGHAKALSPCRSSEISKGAKGRXXXXXXXXXXXXXXXXXXXXXXGTWSMFYKKKR 182
            NN GLCG A  L  C SS  +K ++                        G + +  ++ R
Sbjct: 567  NNSGLCGTAAVLMACISSIENKASEKDHKIVILIIILISSILFLLFVFVGLYFLLCRRVR 626

Query: 183  VQEEETRAKRNDLFCIWNYNGGMVYEDVIEATEGFDDKYCIGMGGYGSVYKAVLSTAQVV 362
             ++ ++R    DLF +W ++G M+YED+I+ T+ F+ KYCIG GGYG+VYKA L T +VV
Sbjct: 627  FRKHKSRETCEDLFALWGHDGEMLYEDIIKVTKEFNSKYCIGGGGYGTVYKAELPTGRVV 686

Query: 363  AVKKIHPAQDDEVVNLRSFQTEVHALTELRHRSIVKLYGFCSH 491
            AVKK+HP QD  + +L++F  E+ ALTE+RHR+IVKLYGFCSH
Sbjct: 687  AVKKLHPQQDGGMADLKAFTAEIRALTEMRHRNIVKLYGFCSH 729


>ref|XP_003557009.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Glycine max]
          Length = 1204

 Score =  146 bits (369), Expect = 1e-33
 Identities = 74/164 (45%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3    NNKGLCGHAKALSPCRSSEISKGAKGRXXXXXXXXXXXXXXXXXXXXXXGTWSMFYKKKR 182
            NNKGLCG+   L PC +S        R                      G W    +   
Sbjct: 826  NNKGLCGNVTGLEPCSTSSGKSHNHMRKKVMIVILPLTLGILILALFAFGVWYHLCQTST 885

Query: 183  VQEEE-TRAKRNDLFCIWNYNGGMVYEDVIEATEGFDDKYCIGMGGYGSVYKAVLSTAQV 359
             +E++ T  +  ++F IW+++G MV+E++IEATE FDDK+ IG+GG G VYKAVL T QV
Sbjct: 886  NKEDQATSIQTPNIFAIWSFDGKMVFENIIEATEDFDDKHLIGVGGQGCVYKAVLPTGQV 945

Query: 360  VAVKKIHPAQDDEVVNLRSFQTEVHALTELRHRSIVKLYGFCSH 491
            VAVKK+H   + E++NL++F  E+ ALTE+RHR+IVKLYGFCSH
Sbjct: 946  VAVKKLHSVPNGEMLNLKAFTCEIQALTEIRHRNIVKLYGFCSH 989


>ref|XP_002274094.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Vitis vinifera]
          Length = 991

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/164 (45%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3    NNKGLCGHAKALSPCRSSEISKGAKGRXXXXXXXXXXXXXXXXXXXXXXGTWSMFYKKKR 182
            NN GLCG A  L  C SS  +K ++                        G + +  ++ R
Sbjct: 584  NNSGLCGTAAVLMVCISSIENKASEKDHKIVILIIILISSILFLLFVFVGLYFLLCRRVR 643

Query: 183  VQEEETRAKR-NDLFCIWNYNGGMVYEDVIEATEGFDDKYCIGMGGYGSVYKAVLSTAQV 359
             ++ ++R     DLF IW ++G M+YED+I+ TE F+ KYCIG GGYG+VYKA L T +V
Sbjct: 644  FRKHKSRETSCEDLFAIWGHDGEMLYEDIIKVTEEFNSKYCIGGGGYGTVYKAELPTGRV 703

Query: 360  VAVKKIHPAQDDEVVNLRSFQTEVHALTELRHRSIVKLYGFCSH 491
            VAVKK+HP QD  + +L++F  E+ ALTE+RHR+IVKLYGFCSH
Sbjct: 704  VAVKKLHPQQDGGMADLKAFTAEIRALTEMRHRNIVKLYGFCSH 747


>emb|CBI36565.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/164 (45%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   NNKGLCGHAKALSPCRSSEISKGAKGRXXXXXXXXXXXXXXXXXXXXXXGTWSMFYKKKR 182
           NN GLCG A  L  C SS  +K ++                        G + +  ++ R
Sbjct: 34  NNSGLCGTAAVLMVCISSIENKASEKDHKIVILIIILISSILFLLFVFVGLYFLLCRRVR 93

Query: 183 VQEEETRAKR-NDLFCIWNYNGGMVYEDVIEATEGFDDKYCIGMGGYGSVYKAVLSTAQV 359
            ++ ++R     DLF IW ++G M+YED+I+ TE F+ KYCIG GGYG+VYKA L T +V
Sbjct: 94  FRKHKSRETSCEDLFAIWGHDGEMLYEDIIKVTEEFNSKYCIGGGGYGTVYKAELPTGRV 153

Query: 360 VAVKKIHPAQDDEVVNLRSFQTEVHALTELRHRSIVKLYGFCSH 491
           VAVKK+HP QD  + +L++F  E+ ALTE+RHR+IVKLYGFCSH
Sbjct: 154 VAVKKLHPQQDGGMADLKAFTAEIRALTEMRHRNIVKLYGFCSH 197


>ref|XP_003545194.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Glycine max]
          Length = 977

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/165 (45%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
 Frame = +3

Query: 3    NNKGLCGHAKALSPCRSSEISKGAKGRXXXXXXXXXXXXXXXXXXXXXXGTWSMFYKK-- 176
            NNKGLCG+A  L PC +  +  G   R                       +  ++Y++  
Sbjct: 591  NNKGLCGNASGLVPCHT--LPHGKMKRNVIIQALLPALGALFLLLLMIGISLCIYYRRAT 648

Query: 177  KRVQEEETRAKRNDLFCIWNYNGGMVYEDVIEATEGFDDKYCIGMGGYGSVYKAVLSTAQ 356
            K  +EE    +  D F IW+Y+G +VYE +IEATEGFDDKY IG GG  SVYKA LST Q
Sbjct: 649  KAKKEEAKEEQTKDYFSIWSYDGKLVYESIIEATEGFDDKYLIGEGGSASVYKASLSTGQ 708

Query: 357  VVAVKKIHPAQDDEVVNLRSFQTEVHALTELRHRSIVKLYGFCSH 491
            +VAVKK+H   D+E +N+R+F +EV AL E++HR+IVKL G+C H
Sbjct: 709  IVAVKKLHAVPDEETLNIRAFTSEVQALAEIKHRNIVKLIGYCLH 753


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