BLASTX nr result

ID: Coptis23_contig00022065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022065
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265771.2| PREDICTED: aspartic proteinase nepenthesin-2...   120   2e-25
emb|CBI24128.3| unnamed protein product [Vitis vinifera]              120   2e-25
emb|CAN65806.1| hypothetical protein VITISV_015630 [Vitis vinifera]   120   2e-25
ref|XP_002882786.1| hypothetical protein ARALYDRAFT_478632 [Arab...   111   1e-22
ref|NP_187876.2| aspartyl protease family protein [Arabidopsis t...   105   6e-21

>ref|XP_002265771.2| PREDICTED: aspartic proteinase nepenthesin-2-like [Vitis vinifera]
          Length = 449

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
 Frame = +2

Query: 398 VFHAHHSSSFKTISCSSDMCQMTLP--FSLAQCPIPETPCQYDYRYADGSRSRGIFANET 571
           VFHA+ SSSFKTI C +DMC++ L   FSL  CP P TPC YDYRY+DGS + G FANET
Sbjct: 133 VFHANLSSSFKTIPCLTDMCKIELMDLFSLTNCPTPLTPCGYDYRYSDGSTALGFFANET 192

Query: 572 VTVGLSSGRKMRLHNVVIGCSSTAEGSSF 658
           VTV L  GRKM+LHNV+IGCS + +G SF
Sbjct: 193 VTVELKEGRKMKLHNVLIGCSESFQGQSF 221



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 43/96 (44%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
 Frame = +1

Query: 4   KVFSAPKTQLERIQELVRMDYHRIQMISRRLG----KRRKXXXXXXXXXXXXXXXXXX-- 165
           +V   PKTQL+R++ELV  D  R  MI  +L      RRK                    
Sbjct: 12  QVMGRPKTQLQRLKELVHSDSVRQLMILHKLRGGQIPRRKAKEVLSSSSGRGSDDAIEVP 71

Query: 166 ----AYSGTGQYFVRFRVGTPSQKFLLVADTGSDLT 261
               A  G GQY V F+VGTPSQKF+LVADTGSDLT
Sbjct: 72  MHPAADYGIGQYSVAFKVGTPSQKFMLVADTGSDLT 107


>emb|CBI24128.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
 Frame = +2

Query: 398 VFHAHHSSSFKTISCSSDMCQMTLP--FSLAQCPIPETPCQYDYRYADGSRSRGIFANET 571
           VFHA+ SSSFKTI C +DMC++ L   FSL  CP P TPC YDYRY+DGS + G FANET
Sbjct: 62  VFHANLSSSFKTIPCLTDMCKIELMDLFSLTNCPTPLTPCGYDYRYSDGSTALGFFANET 121

Query: 572 VTVGLSSGRKMRLHNVVIGCSSTAEGSSF 658
           VTV L  GRKM+LHNV+IGCS + +G SF
Sbjct: 122 VTVELKEGRKMKLHNVLIGCSESFQGQSF 150


>emb|CAN65806.1| hypothetical protein VITISV_015630 [Vitis vinifera]
          Length = 449

 Score =  120 bits (301), Expect = 2e-25
 Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
 Frame = +2

Query: 398 VFHAHHSSSFKTISCSSDMCQMTLP--FSLAQCPIPETPCQYDYRYADGSRSRGIFANET 571
           VFHA+ SSSFKTI C +DMC++ L   FSL  CP P TPC YDYRY+DGS + G FANET
Sbjct: 133 VFHANLSSSFKTIPCLTDMCKIELMDLFSLTNCPTPLTPCGYDYRYSDGSTALGFFANET 192

Query: 572 VTVGLSSGRKMRLHNVVIGCSSTAEGSSF 658
           VTV L  GRKM+LHNV+IGCS + +G SF
Sbjct: 193 VTVELKEGRKMKLHNVLIGCSESFQGQSF 221



 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 44/96 (45%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
 Frame = +1

Query: 4   KVFSAPKTQLERIQELVRMDYHRIQMISRRLG----KRRKXXXXXXXXXXXXXXXXXX-- 165
           +V   PKTQL+R++ELV  D  R  MI  +L      RRK                    
Sbjct: 12  QVMGRPKTQLQRLKELVHSDSVRQLMILHKLRGGQIPRRKAKEVLSSSSGRGSDDAIEVP 71

Query: 166 ----AYSGTGQYFVRFRVGTPSQKFLLVADTGSDLT 261
               A  G GQYFV F+VGTPSQKF+LVADTGSDLT
Sbjct: 72  MHPAADYGIGQYFVAFKVGTPSQKFMLVADTGSDLT 107


>ref|XP_002882786.1| hypothetical protein ARALYDRAFT_478632 [Arabidopsis lyrata subsp.
           lyrata] gi|297328626|gb|EFH59045.1| hypothetical protein
           ARALYDRAFT_478632 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +2

Query: 398 VFHAHHSSSFKTISCSSDMCQMTLP--FSLAQCPIPETPCQYDYRYADGSRSRGIFANET 571
           VF A  S SFKT+ C +  C++ L   FSL+ CP P TPC YDYRYADGS ++G+FA ET
Sbjct: 131 VFRAEESKSFKTVGCFTQTCKVDLMNLFSLSTCPTPSTPCSYDYRYADGSAAQGVFAKET 190

Query: 572 VTVGLSSGRKMRLHNVVIGCSSTAEGSSF 658
           +TVGL++GRK RL  +++GCSS+  G SF
Sbjct: 191 ITVGLTNGRKARLRGLLVGCSSSFSGQSF 219


>ref|NP_187876.2| aspartyl protease family protein [Arabidopsis thaliana]
           gi|11994412|dbj|BAB02414.1| chloroplast nucleoid DNA
           binding protein-like [Arabidopsis thaliana]
           gi|332641715|gb|AEE75236.1| aspartyl protease family
           protein [Arabidopsis thaliana]
          Length = 461

 Score =  105 bits (263), Expect = 6e-21
 Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = +2

Query: 398 VFHAHHSSSFKTISCSSDMCQMTLP--FSLAQCPIPETPCQYDYRYADGSRSRGIFANET 571
           VF A  S SFKT+ C +  C++ L   FSL  CP P TPC YDYRYADGS ++G+FA ET
Sbjct: 146 VFRADESKSFKTVGCLTQTCKVDLMNLFSLTTCPTPSTPCSYDYRYADGSAAQGVFAKET 205

Query: 572 VTVGLSSGRKMRLHNVVIGCSSTAEGSSF 658
           +TVGL++GR  RL   +IGCSS+  G SF
Sbjct: 206 ITVGLTNGRMARLPGHLIGCSSSFTGQSF 234


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