BLASTX nr result

ID: Coptis23_contig00022052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022052
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                  58   3e-07
ref|XP_004154040.1| PREDICTED: uncharacterized protein LOC101215...    59   7e-07
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]    58   1e-06
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]    58   1e-06
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]    58   2e-06

>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score = 57.8 bits (138), Expect(2) = 3e-07
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -3

Query: 366 MVYRLSLPPKLAWVHNVFHISMLRKCG*DPTQVVHPTQLEISDDLSYV 223
           + YRL+LPP L+ VH+VFH+SMLRK   DP+ VV    LEI ++LSYV
Sbjct: 824 VAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYV 871



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 218 VKRPKNKTMDLVTVQWRDNK 159
           VK  +NK + LV V WR+++
Sbjct: 882 VKTLRNKQIPLVKVLWRNHR 901


>ref|XP_004154040.1| PREDICTED: uncharacterized protein LOC101215968 [Cucumis sativus]
          Length = 112

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -3

Query: 366 MVYRLSLPPKLAWVHNVFHISMLRKCG*DPTQVVHPTQLEISDDLSYV 223
           + YRL+LPP L+ +HNVFH+SMLRK   DP+ VV    LEI ++LSYV
Sbjct: 30  VAYRLALPPSLSAIHNVFHVSMLRKYVADPSHVVDYEPLEIDENLSYV 77


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -3

Query: 366  MVYRLSLPPKLAWVHNVFHISMLRKCG*DPTQVVHPTQLEISDDLSYV 223
            + Y+L LP +L+ VH+VFH+SMLRKC  DPT VV    ++IS+D SYV
Sbjct: 1287 VAYKLILPQQLSLVHDVFHVSMLRKCTPDPTWVVDMQDVQISEDTSYV 1334


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -3

Query: 366  MVYRLSLPPKLAWVHNVFHISMLRKCG*DPTQVVHPTQLEISDDLSYV 223
            + Y+L LP +L+ VH+VFH+SMLRKC  DPT VV    ++IS+D SYV
Sbjct: 1395 VAYKLILPQQLSLVHDVFHVSMLRKCTPDPTWVVDMQDVQISEDTSYV 1442


>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -3

Query: 366  MVYRLSLPPKLAWVHNVFHISMLRKCG*DPTQVVHPTQLEISDDLSYV 223
            + Y+L LP +L+ VH+VFH+SMLRKC  DPT VV    ++IS+D SYV
Sbjct: 1519 VTYKLILPQQLSLVHDVFHVSMLRKCTPDPTWVVDLQDVQISEDTSYV 1566


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