BLASTX nr result

ID: Coptis23_contig00022046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022046
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
emb|CBI21310.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodies...   120   1e-25
ref|XP_004148001.1| PREDICTED: glycerophosphodiester phosphodies...   108   4e-22
ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22

>ref|XP_002328930.1| predicted protein [Populus trichocarpa] gi|222839360|gb|EEE77697.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 5/94 (5%)
 Frame = -3

Query: 269 MALKAVHMSDVPNLDQVHDNPSL--YSTQL---VPKGRATSFLPPKFAVIGHRGNGMNML 105
           MALKAVH+SDVPNLD V DN SL  YST+L   V   RA +F  PKF V GHRGNGMN+L
Sbjct: 1   MALKAVHVSDVPNLDHVPDNASLSLYSTRLSKGVEMNRAATFKMPKFMVAGHRGNGMNVL 60

Query: 104 SSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQ 3
            S+DGRMK IKENSI+SFN+AAK  +D++EFDVQ
Sbjct: 61  QSTDGRMKEIKENSIMSFNSAAKHPIDFIEFDVQ 94


>emb|CBI21310.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  120 bits (301), Expect = 1e-25
 Identities = 69/94 (73%), Positives = 77/94 (81%), Gaps = 5/94 (5%)
 Frame = -3

Query: 269 MALKAVHMSDVPNLDQVHDNPSL--YSTQL---VPKGRATSFLPPKFAVIGHRGNGMNML 105
           MALKAVH+SDVP LDQV +N SL  YST+    V  GR+ SF  PKF VIGHRG+GMNML
Sbjct: 1   MALKAVHVSDVPCLDQVPENASLGLYSTRFSAGVDVGRS-SFRIPKFLVIGHRGSGMNML 59

Query: 104 SSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQ 3
            SSD RMKAIKENSILSFNTAA+F+VD+VEFDVQ
Sbjct: 60  QSSDRRMKAIKENSILSFNTAAEFSVDFVEFDVQ 93


>ref|XP_002273468.1| PREDICTED: glycerophosphodiester phosphodiesterase GDE1 [Vitis
           vinifera] gi|147820259|emb|CAN71478.1| hypothetical
           protein VITISV_038621 [Vitis vinifera]
          Length = 382

 Score =  120 bits (301), Expect = 1e-25
 Identities = 69/94 (73%), Positives = 77/94 (81%), Gaps = 5/94 (5%)
 Frame = -3

Query: 269 MALKAVHMSDVPNLDQVHDNPSL--YSTQL---VPKGRATSFLPPKFAVIGHRGNGMNML 105
           MALKAVH+SDVP LDQV +N SL  YST+    V  GR+ SF  PKF VIGHRG+GMNML
Sbjct: 1   MALKAVHVSDVPCLDQVPENASLGLYSTRFSAGVDVGRS-SFRIPKFLVIGHRGSGMNML 59

Query: 104 SSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQ 3
            SSD RMKAIKENSILSFNTAA+F+VD+VEFDVQ
Sbjct: 60  QSSDRRMKAIKENSILSFNTAAEFSVDFVEFDVQ 93


>ref|XP_004148001.1| PREDICTED: glycerophosphodiester phosphodiesterase gde1-like
           [Cucumis sativus]
          Length = 390

 Score =  108 bits (271), Expect = 4e-22
 Identities = 63/94 (67%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
 Frame = -3

Query: 269 MALKAVHMSDVPNLDQVHDNPSL--YSTQLVPKG---RATSFLPPKFAVIGHRGNGMNML 105
           MALKAVH+SDVPNLDQV  N SL  YS +   KG      +F   KF VIGHRG+GMN L
Sbjct: 1   MALKAVHVSDVPNLDQVPANASLALYSNRF-SKGVEFGQKAFRASKFLVIGHRGSGMNAL 59

Query: 104 SSSDGRMKAIKENSILSFNTAAKFNVDYVEFDVQ 3
            SSD RM+AIKENSILSFN AAKF +D+VEFDVQ
Sbjct: 60  QSSDRRMRAIKENSILSFNAAAKFPIDFVEFDVQ 93


>ref|XP_002298651.1| predicted protein [Populus trichocarpa] gi|222845909|gb|EEE83456.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  108 bits (270), Expect = 5e-22
 Identities = 56/89 (62%), Positives = 66/89 (74%)
 Frame = -3

Query: 269 MALKAVHMSDVPNLDQVHDNPSLYSTQLVPKGRATSFLPPKFAVIGHRGNGMNMLSSSDG 90
           MALKAVH+SDVPNLD V +N SL            +F  PKF V GHRGNGMN+L S+D 
Sbjct: 1   MALKAVHVSDVPNLDHVPENASLSLCS------TPAFKTPKFLVFGHRGNGMNILQSTDR 54

Query: 89  RMKAIKENSILSFNTAAKFNVDYVEFDVQ 3
           RMKAIKENSI+SFN+AAK  +D++EFDVQ
Sbjct: 55  RMKAIKENSIMSFNSAAKHPIDFIEFDVQ 83


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