BLASTX nr result

ID: Coptis23_contig00022042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022042
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305911.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002305911.1| predicted protein [Populus trichocarpa] gi|222848875|gb|EEE86422.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
 Frame = -1

Query: 248 MRVSVGPSDLSSPANINAILNGLEIMKMLKNDGSLQKHGSKKK--HIAIXXXXXXXXXXX 75
           +RVSVGPS +S P  +NAILNG+EIMKM+   GS  + GSKK+   IA+           
Sbjct: 92  VRVSVGPSAISGPLKVNAILNGVEIMKMINPSGS--QSGSKKRTVWIAVGSSIGGFVVLC 149

Query: 74  XXXXXXXVICRMKKSK---RAVESVSW 3
                  + C+ KK K   R VES  W
Sbjct: 150 LTVFVVTLSCKCKKKKPKPRRVESAGW 176


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