BLASTX nr result

ID: Coptis23_contig00022039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022039
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272288.2| PREDICTED: uncharacterized protein LOC100251...    66   3e-09
gb|AFK42676.1| unknown [Medicago truncatula]                           62   5e-08
ref|XP_003593873.1| hypothetical protein MTR_2g018740 [Medicago ...    62   5e-08
gb|AEW69793.1| Hop-interacting protein THI030 [Solanum lycopersi...    60   2e-07
ref|XP_002298838.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002272288.2| PREDICTED: uncharacterized protein LOC100251522 [Vitis vinifera]
           gi|297740769|emb|CBI30951.3| unnamed protein product
           [Vitis vinifera]
          Length = 512

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/80 (48%), Positives = 45/80 (56%)
 Frame = -1

Query: 342 RNWSVLKSTPELQKSKMNVLYATRTTLNLP*SGPQPLWTHFGPKR*GPKSFPKEGPMSLD 163
           RNWSVLKSTP+L+KSK                          PK        KEGPMS++
Sbjct: 465 RNWSVLKSTPQLRKSKDK------------------------PK--------KEGPMSVE 492

Query: 162 DAIDDSENLTDFLLDFNEDE 103
           +A+DDSENLTDFLLDF EDE
Sbjct: 493 EAVDDSENLTDFLLDFEEDE 512


>gb|AFK42676.1| unknown [Medicago truncatula]
          Length = 101

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = -1

Query: 342 RNWSVLKSTPELQKSKMNVLYATRTTLNLP*SGPQPLWTHFGPKR*GPKSFPKEGPMSLD 163
           RNWSVLK+TP+L+KSK                 P+P                KEGPM+LD
Sbjct: 55  RNWSVLKTTPQLRKSK-----------------PKP---------------KKEGPMTLD 82

Query: 162 DAIDDSENLTDFLLDFNED 106
           +A+ DSENLTDFLLDF E+
Sbjct: 83  EAVGDSENLTDFLLDFEEE 101


>ref|XP_003593873.1| hypothetical protein MTR_2g018740 [Medicago truncatula]
           gi|355482921|gb|AES64124.1| hypothetical protein
           MTR_2g018740 [Medicago truncatula]
          Length = 540

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = -1

Query: 342 RNWSVLKSTPELQKSKMNVLYATRTTLNLP*SGPQPLWTHFGPKR*GPKSFPKEGPMSLD 163
           RNWSVLK+TP+L+KSK                 P+P                KEGPM+LD
Sbjct: 494 RNWSVLKTTPQLRKSK-----------------PKP---------------KKEGPMTLD 521

Query: 162 DAIDDSENLTDFLLDFNED 106
           +A+ DSENLTDFLLDF E+
Sbjct: 522 EAVGDSENLTDFLLDFEEE 540


>gb|AEW69793.1| Hop-interacting protein THI030 [Solanum lycopersicum]
          Length = 528

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/80 (43%), Positives = 41/80 (51%)
 Frame = -1

Query: 342 RNWSVLKSTPELQKSKMNVLYATRTTLNLP*SGPQPLWTHFGPKR*GPKSFPKEGPMSLD 163
           RNWSVLKS PEL KSK                                   PK+  MSL+
Sbjct: 482 RNWSVLKSNPELSKSKGK---------------------------------PKKKDMSLE 508

Query: 162 DAIDDSENLTDFLLDFNEDE 103
           +A+DDSENLTDFL+DF+EDE
Sbjct: 509 EAVDDSENLTDFLMDFDEDE 528


>ref|XP_002298838.1| predicted protein [Populus trichocarpa] gi|222846096|gb|EEE83643.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/80 (43%), Positives = 43/80 (53%)
 Frame = -1

Query: 342 RNWSVLKSTPELQKSKMNVLYATRTTLNLP*SGPQPLWTHFGPKR*GPKSFPKEGPMSLD 163
           RNWSV K+TP+ +KSK                          PK        KEGP+SL+
Sbjct: 446 RNWSVYKTTPQARKSKDK------------------------PK--------KEGPLSLE 473

Query: 162 DAIDDSENLTDFLLDFNEDE 103
           +AIDDSENLTDFL+DF +DE
Sbjct: 474 EAIDDSENLTDFLMDFEQDE 493


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