BLASTX nr result

ID: Coptis23_contig00022030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022030
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203...    49   2e-07
ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306...    44   5e-07
ref|XP_002335774.1| predicted protein [Populus trichocarpa] gi|2...    47   7e-07
ref|XP_003634681.1| PREDICTED: uncharacterized protein LOC100855...    46   9e-07
ref|XP_003527260.1| PREDICTED: uncharacterized protein LOC100804...    42   1e-06

>ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203530 [Cucumis sativus]
           gi|449478162|ref|XP_004155238.1| PREDICTED:
           uncharacterized protein LOC101231659 [Cucumis sativus]
          Length = 59

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +3

Query: 63  GRGAIGEKWSGRFLWLCALGSAVGLWMV 146
           GRG IG+KWS R LW+CALGS +G++MV
Sbjct: 3   GRGVIGDKWSTRVLWVCALGSVIGMYMV 30



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +2

Query: 200 VGLWMVGVERQAQNRERMLRAAME 271
           +G++MV  ERQ QNR+RML  +++
Sbjct: 25  IGMYMVAQERQLQNRQRMLTESLK 48


>ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306575 [Glycine max]
           gi|255628927|gb|ACU14808.1| unknown [Glycine max]
          Length = 60

 Score = 43.5 bits (101), Expect(2) = 5e-07
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 66  RGAIGEKWSGRFLWLCALGSAVGLWMV 146
           RG I +KWS R LW CA+GSAV L+MV
Sbjct: 4   RGVIADKWSMRILWACAIGSAVSLYMV 30



 Score = 35.0 bits (79), Expect(2) = 5e-07
 Identities = 19/29 (65%), Positives = 22/29 (75%), Gaps = 3/29 (10%)
 Frame = +2

Query: 200 VGLWMVGVERQAQNRERMLR---AAMEAG 277
           V L+MV VERQAQNR+RML     AME+G
Sbjct: 25  VSLYMVAVERQAQNRQRMLAEELKAMESG 53


>ref|XP_002335774.1| predicted protein [Populus trichocarpa]
           gi|224128173|ref|XP_002329099.1| predicted protein
           [Populus trichocarpa] gi|222834723|gb|EEE73186.1|
           predicted protein [Populus trichocarpa]
           gi|222869768|gb|EEF06899.1| predicted protein [Populus
           trichocarpa]
          Length = 60

 Score = 47.4 bits (111), Expect(2) = 7e-07
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +3

Query: 63  GRGAIGEKWSGRFLWLCALGSAVGLWMV 146
           GRG IG+KWS R LW CA+GS V L+MV
Sbjct: 3   GRGVIGDKWSSRVLWACAIGSVVSLYMV 30



 Score = 30.8 bits (68), Expect(2) = 7e-07
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 200 VGLWMVGVERQAQNRERMLRAAME 271
           V L+MV VERQ QNRERM+   ++
Sbjct: 25  VSLYMVVVERQLQNRERMMAEGLK 48


>ref|XP_003634681.1| PREDICTED: uncharacterized protein LOC100855163 [Vitis vinifera]
          Length = 58

 Score = 45.8 bits (107), Expect(2) = 9e-07
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 66  RGAIGEKWSGRFLWLCALGSAVGLWMV 146
           RG IG+KWS R LWL A+GSA GL+MV
Sbjct: 4   RGVIGDKWSSRILWLVAIGSAAGLYMV 30



 Score = 32.0 bits (71), Expect(2) = 9e-07
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +2

Query: 203 GLWMVGVERQAQNRERMLRAAMEA 274
           GL+MV VERQ QNR++M+   ++A
Sbjct: 26  GLYMVAVERQTQNRQKMMAEKLKA 49


>ref|XP_003527260.1| PREDICTED: uncharacterized protein LOC100804039 [Glycine max]
           gi|255647088|gb|ACU24012.1| unknown [Glycine max]
          Length = 60

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +3

Query: 66  RGAIGEKWSGRFLWLCALGSAVGLWMV 146
           RG + +KWS R LW CA+GSAV L+MV
Sbjct: 4   RGIVPDKWSMRILWACAIGSAVSLYMV 30



 Score = 35.0 bits (79), Expect(2) = 1e-06
 Identities = 19/29 (65%), Positives = 22/29 (75%), Gaps = 3/29 (10%)
 Frame = +2

Query: 200 VGLWMVGVERQAQNRERMLR---AAMEAG 277
           V L+MV VERQAQNR+RML     AME+G
Sbjct: 25  VSLYMVAVERQAQNRQRMLAEELKAMESG 53


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