BLASTX nr result

ID: Coptis23_contig00022029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022029
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG12304.1| 6b-interacting protein 2 [Nicotiana tabacum]           60   7e-07

>dbj|BAG12304.1| 6b-interacting protein 2 [Nicotiana tabacum]
          Length = 424

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
 Frame = -3

Query: 1083 WRNYKHTLYETFVEDEDPSLVKE----VAPRNIPLEDWHKFVDYCNTDKFKAMSARNKLN 916
            WR+ +  L++   E+ DPSL K+    + P  I  + W  F++Y   +K   +S +N++N
Sbjct: 161  WRDKRIKLFD---ENYDPSLGKDANIDLPPAGISKDQWALFLNYRLNEKTMEISCKNRVN 217

Query: 915  REQQIMPSSLGRTSVAIARNELALEEGIPESEITRADSYMLIHKPKE 775
            R++Q +P  LG  S+A   +EL ++ G P    TR   Y + HK K+
Sbjct: 218  RQKQTVPHILGSRSIARTMHELEIKAGRP---YTRGQMYSIAHKKKD 261


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