BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022025
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   119   2e-25
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  123 bits (309), Expect = 2e-26
 Identities = 66/115 (57%), Positives = 81/115 (70%)
 Frame = +3

Query: 153 KVHLRLPLFLQNTILYMYTCCGLTDVAKRFFDKMGEKDVVTWNIMITHLSKQDDDMELAR 332
           K+ L+  +FLQN I+++Y  CG   VA++ FDKM ++DV+TWNIMI  L K  D  E A 
Sbjct: 141 KLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGD-AEGAY 199

Query: 333 KLFDETPERSVRS*TAMIARYVQCGNPKEAIRMFTDMEAAGGTPNEVTVVAVLAA 497
           KLF E PER+VRS T+MI  Y QCG  KEAI +F +ME AG  PNEVTVVAVL A
Sbjct: 200 KLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVA 254


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  123 bits (309), Expect = 2e-26
 Identities = 66/115 (57%), Positives = 81/115 (70%)
 Frame = +3

Query: 153 KVHLRLPLFLQNTILYMYTCCGLTDVAKRFFDKMGEKDVVTWNIMITHLSKQDDDMELAR 332
           K+ L+  +FLQN I+++Y  CG   VA++ FDKM ++DV+TWNIMI  L K  D  E A 
Sbjct: 141 KLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGD-AEGAY 199

Query: 333 KLFDETPERSVRS*TAMIARYVQCGNPKEAIRMFTDMEAAGGTPNEVTVVAVLAA 497
           KLF E PER+VRS T+MI  Y QCG  KEAI +F +ME AG  PNEVTVVAVL A
Sbjct: 200 KLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVA 254


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/115 (58%), Positives = 78/115 (67%)
 Frame = +3

Query: 153 KVHLRLPLFLQNTILYMYTCCGLTDVAKRFFDKMGEKDVVTWNIMITHLSKQDDDMELAR 332
           KV  R  L+LQN I+++Y  CG    A+  F+KM ++DVVTWNIMI  L KQ D  E A 
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDH-EGAY 214

Query: 333 KLFDETPERSVRS*TAMIARYVQCGNPKEAIRMFTDMEAAGGTPNEVTVVAVLAA 497
            LF   PER+VRS T+MIA YVQCG  KEAI +F  ME AG   NEVTVVAVLAA
Sbjct: 215 DLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAA 269


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/115 (58%), Positives = 78/115 (67%)
 Frame = +3

Query: 153 KVHLRLPLFLQNTILYMYTCCGLTDVAKRFFDKMGEKDVVTWNIMITHLSKQDDDMELAR 332
           KV  R  L+LQN I+++Y  CG    A+  F+KM ++DVVTWNIMI  L KQ D  E A 
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDH-EGAY 214

Query: 333 KLFDETPERSVRS*TAMIARYVQCGNPKEAIRMFTDMEAAGGTPNEVTVVAVLAA 497
            LF   PER+VRS T+MIA YVQCG  KEAI +F  ME AG   NEVTVVAVLAA
Sbjct: 215 DLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAA 269


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/108 (50%), Positives = 71/108 (65%)
 Frame = +3

Query: 174 LFLQNTILYMYTCCGLTDVAKRFFDKMGEKDVVTWNIMITHLSKQDDDMELARKLFDETP 353
           LFLQN IL +Y  CG    A   F+KM ++D VTWNI+I  L+K+ D ++ A   F   P
Sbjct: 45  LFLQNMILNLYGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGD-IDGAYGFFLRMP 103

Query: 354 ERSVRS*TAMIARYVQCGNPKEAIRMFTDMEAAGGTPNEVTVVAVLAA 497
            ++VRS T+MI+ +VQCG P EAI +F  +E     PNEVTVV+VLAA
Sbjct: 104 NKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAA 151