BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022017
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   222   7e-56
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   213   3e-53
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   208   1e-51
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   206   7e-51
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   205   9e-51

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  222 bits (566), Expect = 7e-56
 Identities = 114/268 (42%), Positives = 164/268 (61%)
 Frame = -3

Query: 816  RGLRKGDPLSPLLFILCMEVLSRLINKLVSDNKIHGIKIAKNSSPIAHLLFADDAFIFCR 637
            RGLR+GDPLSP LF++C E LS L+        IHG+KI    SPI+HL FADD+ +F R
Sbjct: 640  RGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIR 699

Query: 636  ADIKEVNSVLAILNDFCHITGQEINFEKSGVHFSNNIPSGKVIDIQKILNMKRIVKGEKY 457
            A  +EV +V+ IL+ +   +GQ++N EKS + +S N+   K+  +Q  L  K +   EKY
Sbjct: 700  ATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKY 759

Query: 456  LGTKLFLGQPKSEIFNDLILKINKNISGWKSKILSQAARTVLINSITSAIPVYHMSTFLL 277
            LG   F+G  K  +F  +  ++ K + GWK K LSQA R VLI ++  AIP Y M  F++
Sbjct: 760  LGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVI 819

Query: 276  PIRITDKINAIQRDFWWGKQTEKNKPCYLKTWSFICQSKKSGGLGIRDSKLNNLAHLTRI 97
            P  I D I  + R+F+WG++ E+ +  ++  W  +   KK GGLGIR+  + N A L + 
Sbjct: 820  PKSIIDGIEKMCRNFFWGQKEEERRVAWV-AWEKLFLPKKEGGLGIRNFDVFNRALLAKQ 878

Query: 96   FWHILTNPTTLVASQLKSKYFPNNNILQ 13
             W ILT P +L+A  +K KYFP +N L+
Sbjct: 879  AWRILTKPDSLMARVIKGKYFPRSNFLE 906


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  213 bits (543), Expect = 3e-53
 Identities = 106/267 (39%), Positives = 161/267 (60%)
 Frame = -3

Query: 816  RGLRKGDPLSPLLFILCMEVLSRLINKLVSDNKIHGIKIAKNSSPIAHLLFADDAFIFCR 637
            RGLR+GDPLSP LFI+  +  S++I + V D ++HG K +++   I+HL FADD+ +F R
Sbjct: 635  RGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTR 694

Query: 636  ADIKEVNSVLAILNDFCHITGQEINFEKSGVHFSNNIPSGKVIDIQKILNMKRIVKGEKY 457
            A+ +E   ++ ILN +   +GQ+IN+EKS V +S  +   +  ++  ILNM+++ + EKY
Sbjct: 695  ANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKY 754

Query: 456  LGTKLFLGQPKSEIFNDLILKINKNISGWKSKILSQAARTVLINSITSAIPVYHMSTFLL 277
            LG     G+ K  IF+ LI +I K + GWK K+LS+A + VL+ S+  AIP Y M  +  
Sbjct: 755  LGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKF 814

Query: 276  PIRITDKINAIQRDFWWGKQTEKNKPCYLKTWSFICQSKKSGGLGIRDSKLNNLAHLTRI 97
            P+ I  KI +    FWWG    + K  + K W  +C  K  GG+G +D  + N A L R 
Sbjct: 815  PVFIIQKIQSAMARFWWGSSDTQRK-IHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQ 873

Query: 96   FWHILTNPTTLVASQLKSKYFPNNNIL 16
             W +   P +L+   +K+KYFPN + L
Sbjct: 874  AWRLTREPQSLLGRVMKAKYFPNCDFL 900


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 653

 Score =  208 bits (529), Expect = 1e-51
 Identities = 111/267 (41%), Positives = 157/267 (58%)
 Frame = -3

Query: 816  RGLRKGDPLSPLLFILCMEVLSRLINKLVSDNKIHGIKIAKNSSPIAHLLFADDAFIFCR 637
            RGLR+GDPLSP LFILC E +S LI +   +N +HG+K+ K +  ++HLLFADD+F+F R
Sbjct: 223  RGLRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFR 282

Query: 636  ADIKEVNSVLAILNDFCHITGQEINFEKSGVHFSNNIPSGKVIDIQKILNMKRIVKGEKY 457
            A+  E  ++  IL+ + + + Q IN +KS ++FS N+P  K   +  +L +   +   KY
Sbjct: 283  ANENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKY 342

Query: 456  LGTKLFLGQPKSEIFNDLILKINKNISGWKSKILSQAARTVLINSITSAIPVYHMSTFLL 277
            LG    +G+ K  IFN +  +I   ISG  SK+LSQA + VLI S+  AIP Y MS FLL
Sbjct: 343  LGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLL 402

Query: 276  PIRITDKINAIQRDFWWGKQTEKNKPCYLKTWSFICQSKKSGGLGIRDSKLNNLAHLTRI 97
            P  I D I  +   FWWG + E        +W  +   K+ GG+G R     +LA   + 
Sbjct: 403  PHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSGKQ 462

Query: 96   FWHILTNPTTLVASQLKSKYFPNNNIL 16
             W+ LTNP  +V+   K+KYF N N L
Sbjct: 463  CWNFLTNPDAMVSRIFKAKYFTNENFL 489


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  206 bits (523), Expect = 7e-51
 Identities = 105/267 (39%), Positives = 162/267 (60%)
 Frame = -3

Query: 816 RGLRKGDPLSPLLFILCMEVLSRLINKLVSDNKIHGIKIAKNSSPIAHLLFADDAFIFCR 637
           RGLR+GDPLSP LFIL +E LS LI+K V+   IHG+K+ + +  ++HLLFAD+ F+FCR
Sbjct: 19  RGLRQGDPLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFADNCFLFCR 78

Query: 636 ADIKEVNSVLAILNDFCHITGQEINFEKSGVHFSNNIPSGKVIDIQKILNMKRIVKGEKY 457
           A++ E   +L IL  +   +GQEIN  KS V FS N+      D+ +I+ ++ ++   KY
Sbjct: 79  ANVVEAQRLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRHVMGTGKY 138

Query: 456 LGTKLFLGQPKSEIFNDLILKINKNISGWKSKILSQAARTVLINSITSAIPVYHMSTFLL 277
           LG    + + K  +F+ +   I K I+ W+ + LS+A + V+I S+  +IP Y MS +LL
Sbjct: 139 LGLPSMIDRDKWSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLL 198

Query: 276 PIRITDKINAIQRDFWWGKQTEKNKPCYLKTWSFICQSKKSGGLGIRDSKLNNLAHLTRI 97
           P  + D I  +   FWWG ++  N+      W  +   K+ GG+G R+ K  N+A + + 
Sbjct: 199 PSSVIDDIEKMVNAFWWGGRS-NNRGIKWMAWEHMACPKEFGGMGFRNFKAFNIAMVAKQ 257

Query: 96  FWHILTNPTTLVASQLKSKYFPNNNIL 16
            W +L+ P +LVA   KS+YFP ++ L
Sbjct: 258 GWSLLSTPESLVARVFKSRYFPRSSFL 284


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  205 bits (522), Expect = 9e-51
 Identities = 99/272 (36%), Positives = 169/272 (62%)
 Frame = -3

Query: 834  GHCKSKRGLRKGDPLSPLLFILCMEVLSRLINKLVSDNKIHGIKIAKNSSPIAHLLFADD 655
            G     RGLR+GDPLSP LFIL  +  S+++ + V   +IHG K ++N   I+HLLFADD
Sbjct: 632  GSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADD 691

Query: 654  AFIFCRADIKEVNSVLAILNDFCHITGQEINFEKSGVHFSNNIPSGKVIDIQKILNMKRI 475
            + +F RA  +E  +++ ILN +   +GQ+IN+EKS V FS  +   K  ++  +L+M+++
Sbjct: 692  SLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQV 751

Query: 474  VKGEKYLGTKLFLGQPKSEIFNDLILKINKNISGWKSKILSQAARTVLINSITSAIPVYH 295
             + +KYLG     G+ K  +F +L+ ++ K + GWK K+LS+A + VLI ++  A+P Y 
Sbjct: 752  DRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYL 811

Query: 294  MSTFLLPIRITDKINAIQRDFWWGKQTEKNKPCYLKTWSFICQSKKSGGLGIRDSKLNNL 115
            M  + LP+ +  +I++    FWWG + ++ K  +L +W  +C+ K  GG+G +D  + N 
Sbjct: 812  MGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWL-SWEKMCKPKCMGGMGFKDLAVFND 870

Query: 114  AHLTRIFWHILTNPTTLVASQLKSKYFPNNNI 19
            A L +  W +L N  +L++  + +KY+P+ ++
Sbjct: 871  ALLGKQVWRLLHNKESLLSRVMSAKYYPHGDV 902