BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00022000
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    82   3e-14

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
 Frame = -1

Query: 507  LWHDIWCNSSPLL--LNAQAVAELQFPINATVDELLSEGRWNE-VVQNIQCNRLREDILN 337
            LW D W   SPL      + + +     NA V+ L+    W     Q I  + + E I +
Sbjct: 776  LWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS 835

Query: 336  TRINKHLDQDRVVWKPHQSGKFTSSSAYEALRRKGEKVRWQRLVWGRLVIPRHSFTTWQL 157
                K   +D ++W    + +F+   A+E LRR  + V W  +VW +  +PRHSF  W +
Sbjct: 836  NSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMV 895

Query: 156  FSNNLSTQDRLIYKMIISFLSCYLC-NHREFSNHLYFECVYSQEI 25
                L+TQD+L    I     C LC  + E  NHL+FEC Y++ I
Sbjct: 896  VQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 940


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
 Frame = -1

Query: 507 LWHDIWCNSSPLL--LNAQAVAELQFPINATVDELLSEGRWNE-VVQNIQCNRLREDILN 337
           LW D W   SPL      + + +     NA V+ L+    W     Q I  + + E I +
Sbjct: 61  LWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS 120

Query: 336 TRINKHLDQDRVVWKPHQSGKFTSSSAYEALRRKGEKVRWQRLVWGRLVIPRHSFTTWQL 157
               K   +D +VW    + +F+   A+E LRR    V W  +VW +  +PRHSF  W +
Sbjct: 121 NSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMV 180

Query: 156 FSNNLSTQDRLIYKMIISFLSCYLC-NHREFSNHLYFECVYSQEI 25
               L+TQD+L    I     C LC  + E  NHL+FEC Y++ I
Sbjct: 181 VQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 225


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
 Frame = -1

Query: 507  LWHDIWCNSSPLL--LNAQAVAELQFPINATVDELLSEGRWNE-VVQNIQCNRLREDILN 337
            LW D W   SPL      + + +     NA V+ L+    W     Q I  + + E I +
Sbjct: 1116 LWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS 1175

Query: 336  TRINKHLDQDRVVWKPHQSGKFTSSSAYEALRRKGEKVRWQRLVWGRLVIPRHSFTTWQL 157
                K   +D +VW    + +F    A+E LRR  + V W  +VW +  +PRHSF  W  
Sbjct: 1176 NSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMA 1235

Query: 156  FSNNLSTQDRLIYKMIISFLSCYLC-NHREFSNHLYFECVYSQEI 25
                L+TQD+L    I     C LC  + E  NHL+FEC Y++ I
Sbjct: 1236 VQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 1280


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
 Frame = -1

Query: 507 LWHDIWCNSSPLL--LNAQAVAELQFPINATVDELLSEGRWNE-VVQNIQCNRLREDILN 337
           LW D W   SPL      + + +     NA V+ L+    W     Q I  + + E I +
Sbjct: 243 LWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPS 302

Query: 336 TRINKHLDQDRVVWKPHQSGKFTSSSAYEALRRKGEKVRWQRLVWGRLVIPRHSFTTWQL 157
               K   +D +VW    + +F+   A+E LRR  + V W  +VW +  +PRHSF  W  
Sbjct: 303 NSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMA 362

Query: 156 FSNNLSTQDRLIYKMIISFLSCYLC-NHREFSNHLYFECVYSQEI 25
               L+TQD+L    I     C LC  + E  NHL+FEC Y++ I
Sbjct: 363 VQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 407


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
 Frame = -1

Query: 504  WHDIWCNSSPLL--LNAQAVAELQFPINATVDELLSEGRWNEVVQNIQCNRLREDILNTR 331
            WHD WC    L   + ++   +L  P NATV E+++  R      +   N+++  I   R
Sbjct: 1104 WHDHWCPLGRLHQHMGSRGTIDLGIPNNATVAEVMNTHRRKRHRADF-LNQIKSQIELAR 1162

Query: 330  INKHLDQDRVVWKPHQS---GKFTSSSAYEALRRKGEKVRWQRLVWGRLVIPRHSFTTWQ 160
             ++  D DR +WK  +      F+SS  ++ +R    +  W R VW     P++SF TW 
Sbjct: 1163 QDRSTDGDRSLWKQKEDTFKSSFSSSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWL 1222

Query: 159  LFSNNLSTQDRLIYKMIISFLSCYLCNHR-EFSNHLYFECVYSQEI 25
             F N L+T D++      +   C  C    E  +HL+F C YS  +
Sbjct: 1223 AFHNRLTTSDKICKWNSGARYDCVFCGEELETRDHLFFSCPYSSHV 1268