BLASTX nr result

ID: Coptis23_contig00021992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021992
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160...   121   4e-25
ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160...   118   3e-24
ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258...   104   5e-20
ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-19
ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-18

>ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]
          Length = 248

 Score =  121 bits (303), Expect = 4e-25
 Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 7/165 (4%)
 Frame = -3

Query: 1075 WLVFRPHLPEFQVDMVNIP-LNASASVISPNWEFGFLVENSNKKADIYYDVMEVSLFYKG 899
            WLV RP LPEF+VD   +   + +A  +S +W  GF V N NKK  + YD ++ +LFY  
Sbjct: 83   WLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSVFNPNKKMTVSYDFIDSTLFYNN 142

Query: 898  EFLCETDVSPFEQGKNTESLLWAGFKD----VEKKIVDLISEDSKRGMVSMNVEVMGWIR 731
            EFL +T V PF Q K T+S++ A F      VE   ++ I++D +RG +  NV +   + 
Sbjct: 143  EFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLNKINDDRRRGTIKFNVGISARVG 202

Query: 730  FEAGALRIRSHLMRVLCVDVGIQFNSSTNLGT--WAGGNEMCQVG 602
            F AG  R R  L+RVLC D+ + F+SS + G+    G +  C+VG
Sbjct: 203  FRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLIGESRACRVG 247


>ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]
          Length = 243

 Score =  118 bits (295), Expect = 3e-24
 Identities = 62/152 (40%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
 Frame = -3

Query: 1075 WLVFRPHLPEFQVDMVNIP-LNASASVISPNWEFGFLVENSNKKADIYYDVMEVSLFYKG 899
            WLV RP LPEF+VD   +   + +A  +S +W  GF V N NKK  + YD ++ +LFY  
Sbjct: 83   WLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGFSVFNPNKKMTVSYDFIDSTLFYNN 142

Query: 898  EFLCETDVSPFEQGKNTESLLWAGFKD----VEKKIVDLISEDSKRGMVSMNVEVMGWIR 731
            EFL +T V PF Q K T+S++ A F      VE   ++ I++D +RG +  NV +   + 
Sbjct: 143  EFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASSLNKINDDRRRGTIKFNVGISARVG 202

Query: 730  FEAGALRIRSHLMRVLCVDVGIQFNSSTNLGT 635
            F AG  R R  L+RVLC D+ + F+SS + G+
Sbjct: 203  FRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGS 234


>ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]
          Length = 239

 Score =  104 bits (259), Expect = 5e-20
 Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
 Frame = -3

Query: 1144 FLRRXXXXXXXXXXXXXXXXXXSWLVFRPHLPEFQVDMVNIP-LNASASVISPNWEFGFL 968
            FLRR                   WLV RP LP F V   ++   N SAS +S  W   F 
Sbjct: 56   FLRRFLAAMIAFFIIVGTIIFIVWLVLRPRLPYFSVASASLSSFNVSASQLSGEWNISFD 115

Query: 967  VENSNKKADIYYDVMEVSLFYKGEFLCETDVSPFEQGKNTESLLWAGFKDVEKKI-VDLI 791
            V N NKK  I YD +E S+ YK   L +T ++PF QG   E+ + A F  +   + V  I
Sbjct: 116  VRNPNKKISISYDRIESSIAYKSATLSQTTIAPFYQGTKNETTVTATFAAIGAYVDVLAI 175

Query: 790  SEDSKRGMVSMNVEVMGWIRFEAGALRIRSHLMRVLCVDVGIQFNSSTNLGTWAGGNEMC 611
            + +  RG VS  V+V   + F++G  + RS  +   C D+ +   S+ + G+  GG+  C
Sbjct: 176  NAERTRGSVSFTVKVFARVSFKSGVWKARSRFLSAQCNDIALGLPSNASRGSLVGGSREC 235

Query: 610  QVG 602
            +VG
Sbjct: 236  RVG 238


>ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|222845533|gb|EEE83080.1|
            predicted protein [Populus trichocarpa]
          Length = 248

 Score =  100 bits (248), Expect = 9e-19
 Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
 Frame = -3

Query: 1144 FLRRXXXXXXXXXXXXXXXXXXSWLVFRPHLPEFQVDMVNIP---LNASASVISPNWEFG 974
            FLRR                   WLV RPH PEF+V  ++I    +++S+S ++  W   
Sbjct: 60   FLRRLIIALIIFTGIFFTILFICWLVIRPHFPEFRVTSLSISNFNVSSSSSSVTGTWNAR 119

Query: 973  FLVENSNKKADIYYDVMEVSLFYKGEFLCETDVSPFEQGKNTESLL----WAGFKDVEKK 806
            F V N NKK  I Y+ ++ S+FYK EFL +T + PF QGK   + +     A    + ++
Sbjct: 120  FQVSNPNKKMKISYNEIQTSIFYKSEFLSQTRIPPFRQGKRNVTDIDVEYGATSSYIGER 179

Query: 805  IVDLISEDSKRGMVSMNVEVMGWIRFEAGALRIRSHLMRVLCVDVGIQFNSSTNLGTWAG 626
             V+ I+ D  R +VS N+ ++    F+      R  L+RV C DV +  + +   G   G
Sbjct: 180  TVNQINSDEGRRLVSFNLRIVADAGFKVEGFWARRRLLRVYCNDVAVGTSGNGRSGNLTG 239

Query: 625  GNEMCQV 605
            G   C V
Sbjct: 240  GAVRCSV 246


>ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|222849894|gb|EEE87441.1|
            predicted protein [Populus trichocarpa]
          Length = 246

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
 Frame = -3

Query: 1075 WLVFRPHLPEFQVDMVNIP---LNASASVISPNWEFGFLVENSNKKADIYYDVMEVSLFY 905
            WLV RPHLPEF+V  +++     ++S+S +S NW   F V N NK    Y D+   S++Y
Sbjct: 82   WLVIRPHLPEFRVTSLSVSSFNASSSSSSVSGNWNARFQVYNPNKLKISYGDIQS-SIYY 140

Query: 904  KGEFLCETDVSPFEQGKNTESLLWAGF----KDVEKKIVDLISEDSKRGMVSMNVEVMGW 737
            K EFL +T + PF+Q K   + + A +      +  + V+ I+ D  RG VS N++++  
Sbjct: 141  KSEFLSQTRIPPFKQAKKNVTDINAEYGAMGSYIAGRAVNQINGDKGRGSVSFNLKIVAD 200

Query: 736  IRFEAGALRIRSHLMRVLCVDVGIQFNSSTNLGTWAGGNEMCQVGS 599
              +  G  R R  L+RV C D+ +  + +   G   GG   C+V S
Sbjct: 201  AVYRVGGFRARRRLLRVFCDDLAVGISGNGGSGNLTGGARRCKVYS 246


Top