BLASTX nr result
ID: Coptis23_contig00021988
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00021988
(256 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 96 4e-18
ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat... 93 3e-17
emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera] 93 3e-17
emb|CBI26377.3| unnamed protein product [Vitis vinifera] 92 3e-17
ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat... 91 1e-16
>ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 95.5 bits (236), Expect = 4e-18
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +F MV GLEPD++N N LINGYCK +DEAM L+++++CK L PN+ TYN+LI
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLID 378
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLCK+GR+ +++ +M RGQSP
Sbjct: 379 GLCKLGRMSCVQELVDEMCDRGQSP 403
Score = 66.2 bits (160), Expect = 3e-09
Identities = 30/85 (35%), Positives = 52/85 (61%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A VF +M+ G +PDIV N L+ G+C + + EA +L+ ++ + L+P+V+ YN LI
Sbjct: 284 AQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLIN 343
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
G CK+ V +A +F +++ + P
Sbjct: 344 GYCKIDMVDEAMVLFKEIRCKNLVP 368
Score = 60.5 bits (145), Expect = 1e-07
Identities = 30/85 (35%), Positives = 49/85 (57%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+ +F L+ G+ D+V N+LI+G C + EA +L + + P+ T+N L+
Sbjct: 214 ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVD 273
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
LCK GR+V+A+ +F M RG+ P
Sbjct: 274 ALCKEGRIVEAQGVFAVMMKRGEKP 298
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = -1
Query: 223 GLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIGGLCKVGRVVDA 44
G D + +LING CK + +A+QL +K++ ++PN+ITY+T+I GLCK + DA
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADA 214
Query: 43 KKIFIDMQTRG 11
++F + +RG
Sbjct: 215 LRLFSLVTSRG 225
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A + +MV + PD N L++ CK R+ EA ++ + + KP+++TYN L+
Sbjct: 249 ATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALME 308
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
G C V +A+++F M RG P
Sbjct: 309 GFCLSNNVSEARELFNRMVKRGLEP 333
>ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 92.8 bits (229), Expect = 3e-17
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
AV VF MV G PD+V+ +TLINGYCK +R+++AM L+E++ K L PN +TY+TL+
Sbjct: 323 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 382
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLC VGR+ DA +F +M TRGQ P
Sbjct: 383 GLCHVGRLQDAIALFHEMVTRGQIP 407
Score = 69.7 bits (169), Expect = 2e-10
Identities = 29/78 (37%), Positives = 53/78 (67%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +V +M+ G+EP++V N L++G+C +DEA+++++ + CK P+V++Y+TLI
Sbjct: 288 AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 347
Query: 76 GLCKVGRVVDAKKIFIDM 23
G CK+ R+ A +F +M
Sbjct: 348 GYCKIQRIEKAMYLFEEM 365
Score = 64.7 bits (156), Expect = 8e-09
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+ + + + ++PDI +I+G C+A L+ A L+ L K L PNV TY +I
Sbjct: 428 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 487
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLC+ G + +A K+F +M+ +G SP
Sbjct: 488 GLCQQGLLAEASKLFGEMKRKGYSP 512
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +V ++ G +P+I NTLI G C ++ E + L++K+ + +PNV+TY TLI
Sbjct: 113 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 172
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLCKVG A ++ M+ P
Sbjct: 173 GLCKVGSTSAAIRLLRSMEQGNCQP 197
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = -1
Query: 253 VNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIGG 74
+++F M+ G +P++V TLING CK A++L ++ +P+V+ Y ++I
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 208
Query: 73 LCKVGRVVDAKKIFIDMQTRGQSP 2
LCK +V A +F +M +G SP
Sbjct: 209 LCKDRQVTQAFNLFSEMIHQGISP 232
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/85 (31%), Positives = 50/85 (58%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+ +F MV G PD V+ L++ CK +RLDEA+ L + ++ + P++ Y +I
Sbjct: 393 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 452
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
G+C+ G + A+ +F ++ ++G P
Sbjct: 453 GMCRAGELEAARDLFSNLSSKGLHP 477
>emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 92.8 bits (229), Expect = 3e-17
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
AV VF MV G PD+V+ +TLINGYCK +R+++AM L+E++ K L PN +TY+TL+
Sbjct: 332 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 391
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLC VGR+ DA +F +M TRGQ P
Sbjct: 392 GLCHVGRLQDAIALFHEMVTRGQIP 416
Score = 69.7 bits (169), Expect = 2e-10
Identities = 29/78 (37%), Positives = 53/78 (67%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +V +M+ G+EP++V N L++G+C +DEA+++++ + CK P+V++Y+TLI
Sbjct: 297 AHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLIN 356
Query: 76 GLCKVGRVVDAKKIFIDM 23
G CK+ R+ A +F +M
Sbjct: 357 GYCKIQRIEKAMYLFEEM 374
Score = 64.7 bits (156), Expect = 8e-09
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+ + + + ++PDI +I+G C+A L+ A L+ L K L PNV TY +I
Sbjct: 437 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 496
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLC+ G + +A K+F +M+ +G SP
Sbjct: 497 GLCQQGLLAEASKLFGEMKRKGYSP 521
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +V ++ G +P+I NTLI G C ++ E + L++K+ + +PNV+TY TLI
Sbjct: 122 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 181
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLCKVG A ++ M+ P
Sbjct: 182 GLCKVGSTSAAIRLLRSMEQGNCQP 206
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = -1
Query: 253 VNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIGG 74
+++F M+ G +P++V TLING CK A++L ++ +P+V+ Y ++I
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 217
Query: 73 LCKVGRVVDAKKIFIDMQTRGQSP 2
LCK +V A +F +M +G SP
Sbjct: 218 LCKDRQVTQAFNLFSEMIHQGISP 241
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/85 (31%), Positives = 50/85 (58%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+ +F MV G PD V+ L++ CK +RLDEA+ L + ++ + P++ Y +I
Sbjct: 402 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVID 461
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
G+C+ G + A+ +F ++ ++G P
Sbjct: 462 GMCRAGELEAARDLFSNLSSKGLHP 486
>emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 92.4 bits (228), Expect = 3e-17
Identities = 41/83 (49%), Positives = 63/83 (75%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +F + D G++ ++ + N LINGYCK +++DEA +L+E+++ K LKP+ +TYNTLIG
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIG 364
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQ 8
LC+ GRV A+K+F++MQT GQ
Sbjct: 365 ALCQSGRVRTAQKLFVEMQTCGQ 387
Score = 71.6 bits (174), Expect = 6e-11
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = -1
Query: 238 LMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIGGLCKVG 59
LMVD G PD LI+G CK ++ EA Q+ E + K +P+++TYNTL+ GLC VG
Sbjct: 241 LMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVG 300
Query: 58 RVVDAKKIFIDMQTRG 11
++ DA K+F + RG
Sbjct: 301 QLEDATKLFESLADRG 316
Score = 69.3 bits (168), Expect = 3e-10
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A + LM G EPDI+ NTL+NG C +L++A +L+E L + +K NV +YN LI
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
G CK ++ +A ++F +M+ +G P
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKP 354
Score = 58.2 bits (139), Expect = 7e-07
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
AV +F M + GL D LING CKA++ A++L+EK+K C K +V TY +I
Sbjct: 96 AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNC-KGDVFTYGMIID 154
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
LCK G +A +F +M G P
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILP 179
Score = 57.0 bits (136), Expect = 2e-06
Identities = 29/85 (34%), Positives = 53/85 (62%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+++F M+ AG+ PD+V ++L++G C+ RL EA++ +++++ + + +V TYN+LI
Sbjct: 165 ALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIH 224
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GL + G + M RG SP
Sbjct: 225 GLSRAGLWKEVTWFLNLMVDRGFSP 249
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/85 (31%), Positives = 51/85 (60%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+++F + +P+I + L++G C+A +L+EA + ++++ L+P+ I YN LI
Sbjct: 410 AIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 469
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLC G + +A K+ M+ +G P
Sbjct: 470 GLCNKGMLSEAVKLLWQMEEKGCLP 494
>ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 90.9 bits (224), Expect = 1e-16
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
AV VF +MV G P++ + NTLINGYCK +R+D+AM L+E++ + L PN +TYNTLI
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIH 397
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLC VGR+ DA +F +M GQ P
Sbjct: 398 GLCHVGRLQDAIALFREMVACGQIP 422
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +V +M +G+EPD+V LI+G+C +DEA+++++ + K PNV +YNTLI
Sbjct: 303 AHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLIN 362
Query: 76 GLCKVGRVVDAKKIFIDM 23
G CK+ R+ A +F +M
Sbjct: 363 GYCKIERMDKAMYLFEEM 380
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = -1
Query: 226 AGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIGGLCKVGRVVD 47
+ L+PDI +I+G C+A L++A L+ L K LKPNV TYN + GLCK G + +
Sbjct: 453 SNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDE 512
Query: 46 AKKIFIDM 23
A K+F++M
Sbjct: 513 ATKLFMEM 520
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+++F M+ G +PD+V TLING CK A++L ++ +P+V+ Y TLI
Sbjct: 163 ALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIH 222
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
LCK + A +F +M T+G SP
Sbjct: 223 SLCKDRQQTQAFNLFSEMITKGISP 247
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A+ +F MV G PD+V L++ CK LD+AM L + ++ L P++ Y +I
Sbjct: 408 AIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVID 467
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
G+C+ G + DA+ +F ++ ++G P
Sbjct: 468 GMCRAGELEDARDLFSNLSSKGLKP 492
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/85 (32%), Positives = 46/85 (54%)
Frame = -1
Query: 256 AVNVFLLMVDAGLEPDIVNCNTLINGYCKAKRLDEAMQLYEKLKCKCLKPNVITYNTLIG 77
A +V ++ G +PD + TLI G C ++ EA+ L++K+ + +P+V+ Y TLI
Sbjct: 128 AFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLIN 187
Query: 76 GLCKVGRVVDAKKIFIDMQTRGQSP 2
GLCK G A ++ M+ P
Sbjct: 188 GLCKTGHTSAAIRLLRSMEKGNCQP 212