BLASTX nr result

ID: Coptis23_contig00021983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021983
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246...   287   7e-76
emb|CBI31609.3| unnamed protein product [Vitis vinifera]              287   7e-76
ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativ...   283   8e-75
ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2...   280   9e-74
ref|XP_003545248.1| PREDICTED: protein NEDD1-like [Glycine max]       273   1e-71

>ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera]
          Length = 805

 Score =  287 bits (734), Expect = 7e-76
 Identities = 137/173 (79%), Positives = 153/173 (88%)
 Frame = -2

Query: 519 DPSMALLSSTGGDTVKLFNLSMESDRDPCTLTYSPSPGSHVNSVKWNHTNLVVASAGDDK 340
           DPS ALL+++GGDTVKLF++S+E   DPC L+YSPSPG  VNSVKWNHTNLVVASAGDD+
Sbjct: 6   DPSTALLAASGGDTVKLFDVSVEPG-DPCALSYSPSPGHQVNSVKWNHTNLVVASAGDDR 64

Query: 339 KISLWHKNGQSLGTVPIAGTESGDNINETIXXXXXXXXXSRYICSGGSGQVVRIWDLQRK 160
           K+SLW KNGQS+GT+P++GT+SGDNI E+I         SRYICSGGSGQVVRIWDLQRK
Sbjct: 65  KVSLWRKNGQSMGTIPVSGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWDLQRK 124

Query: 159 RCIKWLKGHTDTITGAMYNCKDEHLASISLRGDLILHNLASGARATELKDPNE 1
           RCIKWL+GHTDTITGAMYNCKDEHLASISL GDLILHNLASGARA ELKDPNE
Sbjct: 125 RCIKWLRGHTDTITGAMYNCKDEHLASISLNGDLILHNLASGARAAELKDPNE 177


>emb|CBI31609.3| unnamed protein product [Vitis vinifera]
          Length = 779

 Score =  287 bits (734), Expect = 7e-76
 Identities = 137/173 (79%), Positives = 153/173 (88%)
 Frame = -2

Query: 519 DPSMALLSSTGGDTVKLFNLSMESDRDPCTLTYSPSPGSHVNSVKWNHTNLVVASAGDDK 340
           DPS ALL+++GGDTVKLF++S+E   DPC L+YSPSPG  VNSVKWNHTNLVVASAGDD+
Sbjct: 5   DPSTALLAASGGDTVKLFDVSVEPG-DPCALSYSPSPGHQVNSVKWNHTNLVVASAGDDR 63

Query: 339 KISLWHKNGQSLGTVPIAGTESGDNINETIXXXXXXXXXSRYICSGGSGQVVRIWDLQRK 160
           K+SLW KNGQS+GT+P++GT+SGDNI E+I         SRYICSGGSGQVVRIWDLQRK
Sbjct: 64  KVSLWRKNGQSMGTIPVSGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWDLQRK 123

Query: 159 RCIKWLKGHTDTITGAMYNCKDEHLASISLRGDLILHNLASGARATELKDPNE 1
           RCIKWL+GHTDTITGAMYNCKDEHLASISL GDLILHNLASGARA ELKDPNE
Sbjct: 124 RCIKWLRGHTDTITGAMYNCKDEHLASISLNGDLILHNLASGARAAELKDPNE 176


>ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativus]
           gi|449495290|ref|XP_004159790.1| PREDICTED: protein
           NEDD1-like [Cucumis sativus]
          Length = 799

 Score =  283 bits (725), Expect = 8e-75
 Identities = 137/175 (78%), Positives = 154/175 (88%), Gaps = 2/175 (1%)
 Frame = -2

Query: 519 DPSMALLSSTGGDTVKLFNLSMESDR--DPCTLTYSPSPGSHVNSVKWNHTNLVVASAGD 346
           DPSMALL+++ GDTVKLF++S+ S+   DPCTL+Y+PSPG  VNSVKWNHTNLVVASAGD
Sbjct: 5   DPSMALLAASAGDTVKLFDVSVHSNDLGDPCTLSYTPSPGYQVNSVKWNHTNLVVASAGD 64

Query: 345 DKKISLWHKNGQSLGTVPIAGTESGDNINETIXXXXXXXXXSRYICSGGSGQVVRIWDLQ 166
           DKKISLW KNGQS+GT+PIAGT+SGDNI E+I         SRY+C+GGSG VVRIWDLQ
Sbjct: 65  DKKISLWRKNGQSMGTIPIAGTDSGDNIEESIFSISFGNKVSRYMCTGGSGHVVRIWDLQ 124

Query: 165 RKRCIKWLKGHTDTITGAMYNCKDEHLASISLRGDLILHNLASGARATELKDPNE 1
           RKRCIKWL+GHT+TITGAMYNCKDEHLASISL GDLILHNLASGARA ELKDPNE
Sbjct: 125 RKRCIKWLRGHTNTITGAMYNCKDEHLASISLSGDLILHNLASGARAAELKDPNE 179


>ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  280 bits (716), Expect = 9e-74
 Identities = 134/173 (77%), Positives = 154/173 (89%)
 Frame = -2

Query: 519 DPSMALLSSTGGDTVKLFNLSMESDRDPCTLTYSPSPGSHVNSVKWNHTNLVVASAGDDK 340
           DPSMALL+++GGDTVKLF++S+E   DPCTL+Y+P+PG  VN+VKWNHTNLVVASAG+DK
Sbjct: 6   DPSMALLAASGGDTVKLFDVSVEPG-DPCTLSYTPTPGCLVNAVKWNHTNLVVASAGEDK 64

Query: 339 KISLWHKNGQSLGTVPIAGTESGDNINETIXXXXXXXXXSRYICSGGSGQVVRIWDLQRK 160
           KISLW KNGQS+GT+P++GT+SGD+I E+I         SRYICSGGSGQVVRIWDLQRK
Sbjct: 65  KISLWRKNGQSMGTIPVSGTDSGDSIEESILAISFSNKGSRYICSGGSGQVVRIWDLQRK 124

Query: 159 RCIKWLKGHTDTITGAMYNCKDEHLASISLRGDLILHNLASGARATELKDPNE 1
           RCIKWL+GHT  ITGAMYNCKDEHLASISL GDLILHNLASGARATELKDPN+
Sbjct: 125 RCIKWLRGHTSPITGAMYNCKDEHLASISLSGDLILHNLASGARATELKDPNK 177


>ref|XP_003545248.1| PREDICTED: protein NEDD1-like [Glycine max]
          Length = 846

 Score =  273 bits (697), Expect = 1e-71
 Identities = 130/179 (72%), Positives = 149/179 (83%), Gaps = 6/179 (3%)
 Frame = -2

Query: 519 DPSMALLSSTGGDTVKLFNLSMESDR------DPCTLTYSPSPGSHVNSVKWNHTNLVVA 358
           DPSMALL+++GGDTVKLF+ S           DPC L+++PSPGS VNSVKWNHTNLVVA
Sbjct: 50  DPSMALLAASGGDTVKLFDASAVKPGVYTPAGDPCALSFTPSPGSQVNSVKWNHTNLVVA 109

Query: 357 SAGDDKKISLWHKNGQSLGTVPIAGTESGDNINETIXXXXXXXXXSRYICSGGSGQVVRI 178
           SAGDDKKISLW KNG S+GT+P+AGT+SGDNI E+I         SRY+CSGG+GQVVRI
Sbjct: 110 SAGDDKKISLWRKNGNSMGTIPVAGTDSGDNIEESILAISFSNKASRYVCSGGTGQVVRI 169

Query: 177 WDLQRKRCIKWLKGHTDTITGAMYNCKDEHLASISLRGDLILHNLASGARATELKDPNE 1
           WDLQRKRCIKWLKGHT+T+TG MYNCKDEHLASISL GDL+LHNLASG +A ELKDPN+
Sbjct: 170 WDLQRKRCIKWLKGHTNTVTGVMYNCKDEHLASISLSGDLMLHNLASGQKAAELKDPNQ 228


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