BLASTX nr result

ID: Coptis23_contig00021938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021938
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544140.1| PREDICTED: uncharacterized protein LOC100816...   112   2e-23
ref|XP_003634409.1| PREDICTED: uncharacterized protein LOC100855...   109   2e-22
emb|CBI19049.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002306620.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003614774.1| hypothetical protein MTR_5g059070 [Medicago ...   105   4e-21

>ref|XP_003544140.1| PREDICTED: uncharacterized protein LOC100816843 [Glycine max]
          Length = 390

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = +3

Query: 3   CLGCKQCNYPMNSDYGSLLEQNRFPMYCQKSTNRLHNICSIYRPFLLYVWDQSDYVPLLI 182
           C GC+ C  P++S +    EQN  P+ C K+++RLH+ICSIYRPFLLYVWD+SDY+P+L+
Sbjct: 207 CTGCQLCGSPLDSKF----EQNAVPLICWKTSSRLHSICSIYRPFLLYVWDESDYMPILV 262

Query: 183 TNKGAELLFGNITAERVYLCYKEERKGLN 269
            N+ AE+LFGNI A +VY  YKE+    N
Sbjct: 263 KNRAAEILFGNIKAGKVYSAYKEQMNNQN 291


>ref|XP_003634409.1| PREDICTED: uncharacterized protein LOC100855011 [Vitis vinifera]
          Length = 347

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/87 (52%), Positives = 64/87 (73%)
 Frame = +3

Query: 3   CLGCKQCNYPMNSDYGSLLEQNRFPMYCQKSTNRLHNICSIYRPFLLYVWDQSDYVPLLI 182
           C GC+ C  P++ + GS  EQ   P+YC++S+N LH +  IYRPF+LYVWD++  + LL+
Sbjct: 154 CNGCQLCGSPLDMESGSTFEQTTIPLYCKRSSNHLHVVSLIYRPFMLYVWDETGCILLLV 213

Query: 183 TNKGAELLFGNITAERVYLCYKEERKG 263
            NK AE+LFGNITAE+VYLCY ++  G
Sbjct: 214 KNKTAEVLFGNITAEKVYLCYMQKHGG 240


>emb|CBI19049.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/87 (52%), Positives = 64/87 (73%)
 Frame = +3

Query: 3   CLGCKQCNYPMNSDYGSLLEQNRFPMYCQKSTNRLHNICSIYRPFLLYVWDQSDYVPLLI 182
           C GC+ C  P++ + GS  EQ   P+YC++S+N LH +  IYRPF+LYVWD++  + LL+
Sbjct: 240 CNGCQLCGSPLDMESGSTFEQTTIPLYCKRSSNHLHVVSLIYRPFMLYVWDETGCILLLV 299

Query: 183 TNKGAELLFGNITAERVYLCYKEERKG 263
            NK AE+LFGNITAE+VYLCY ++  G
Sbjct: 300 KNKTAEVLFGNITAEKVYLCYMQKHGG 326


>ref|XP_002306620.1| predicted protein [Populus trichocarpa] gi|222856069|gb|EEE93616.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 6/96 (6%)
 Frame = +3

Query: 3   CLGCKQCNYPMNSDYGSLLEQNRFPMYCQKSTNRLHNICSIYRPFL------LYVWDQSD 164
           C+GC  C  P+ S+ GS+ +QN   +YC KS N LH +  IYRPF+      LYVWD+S+
Sbjct: 216 CIGCHLCGSPLVSENGSICKQNNISLYCPKSPNHLHAVTLIYRPFMSISSPQLYVWDESE 275

Query: 165 YVPLLITNKGAELLFGNITAERVYLCYKEERKGLNS 272
           Y+PLL+ NK A +LFGNI AERVY C++ + +  NS
Sbjct: 276 YLPLLVRNKAAVVLFGNIRAERVYSCFRGQNRSHNS 311


>ref|XP_003614774.1| hypothetical protein MTR_5g059070 [Medicago truncatula]
           gi|355516109|gb|AES97732.1| hypothetical protein
           MTR_5g059070 [Medicago truncatula]
          Length = 429

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/89 (50%), Positives = 64/89 (71%)
 Frame = +3

Query: 3   CLGCKQCNYPMNSDYGSLLEQNRFPMYCQKSTNRLHNICSIYRPFLLYVWDQSDYVPLLI 182
           C GC+ C  P++S      EQN FP+ C K++ RLH +CSIYRPF+LYVWD+S ++P+L+
Sbjct: 242 CTGCQLCGSPLDSKS----EQNTFPLVCSKNSTRLHAVCSIYRPFMLYVWDESYFMPVLV 297

Query: 183 TNKGAELLFGNITAERVYLCYKEERKGLN 269
            N+ AE+LFGN+ AE+VY  Y+E+    N
Sbjct: 298 KNRAAEILFGNMKAEKVYSSYREQMLSQN 326


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