BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021929
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91070.1| hypothetical protein LOC_Os11g01460 [Oryza sativa...    98   4e-18
gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indi...    93   1e-16
gb|AAT81738.1| hypothetical protein [Oryza sativa Japonica Group...    86   1e-14
emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group]            86   1e-14
ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicag...    85   3e-14

>gb|ABA91070.1| hypothetical protein LOC_Os11g01460 [Oryza sativa Japonica Group]
           gi|125535492|gb|EAY81980.1| hypothetical protein
           OsI_37160 [Oryza sativa Indica Group]
          Length = 567

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 9/237 (3%)
 Frame = +1

Query: 301 FQPLSKLRSGTSKLKIMVRVTRMWESIHWNNNNEVLSRDLLLLDAKGTHMHAKLESKYFK 480
           ++ LS+L +      I V+V R+W+S++ +  +E+LS D++L+D +G  +HA +  K   
Sbjct: 3   YKKLSELTTRGHTWNIKVKVMRLWDSVN-SATDELLSLDMILMDEQGDVIHASIWKKLID 61

Query: 481 EFDKLAKGDVLKEGNIYIIESFDVVLAKAYRPVVHPFVIQFKPQTLIQSVDEEGIEIERY 660
            +        + E ++Y+  +F V  ++ YRPV +   I F   T ++ V E       Y
Sbjct: 62  NYKTQ-----INESSVYVFGNFKVQESQKYRPVCNDLKITFMYNTKVKQVKETAESFPEY 116

Query: 661 NFNFIEYNTIPDKAKQRTLLSDV---------IXXXXXXXXXXXXXXXXXQEIVLMDTKR 813
            F+F   +T+ D+A +   LSDV         I                 +EI L+    
Sbjct: 117 YFDFASIDTLQDRANKDQHLSDVIGLLTRMKPIETRMTRKNTPNPRLAEIREIELLLLGG 176

Query: 814 AEVTITLWGDLVKSIPEDIITQHNLIIIATSLAARDYQDKITLSSVSGTKIYVNLDI 984
            ++ +TLWG L +   ED+I    ++I+ TS   ++Y   ++L S S T+IY NL I
Sbjct: 177 DKIRLTLWGQLARFFSEDVIGNQTVVIV-TSTTVQEYIG-LSLRSSSATRIYTNLHI 231


>gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indica Group]
          Length = 705

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 61/242 (25%), Positives = 117/242 (48%), Gaps = 9/242 (3%)
 Frame = +1

Query: 301 FQPLSKLRSGTSKLKIMVRVTRMWESIHWNNNNEVLSRDLLLLDAKGTHMHAKLESKYFK 480
           ++ +S+L +      I  ++ RMW+S+++  + E++S D+LL+D +G  +HA +      
Sbjct: 3   YKKISELTTKGQTWSIKAKILRMWDSVNFATD-EIMSFDMLLMDEEGETIHATIWKNLID 61

Query: 481 EFDKLAKGDVLKEGNIYIIESFDVVLAKAYRPVVHPFVIQFKPQTLIQSVDEEGIEIERY 660
            F  +     + E +IY   +F V  +  Y PV     I F   T ++ +     + + Y
Sbjct: 62  NFRPM-----ISENSIYAFSNFKVQESTKYCPVDKDLKITFMYNTKVKEMKGASNKFKEY 116

Query: 661 NFNFIEYNTIPDKAKQRTLLSDV---------IXXXXXXXXXXXXXXXXXQEIVLMDTKR 813
            F F    T+ D+  +  +LSDV         I                 +EI L+    
Sbjct: 117 YFEFATRETLVDRVNKDKILSDVIGLLTKIKPIESRMIMKNSTNPRPKDIREIELLLLDG 176

Query: 814 AEVTITLWGDLVKSIPEDIITQHNLIIIATSLAARDYQDKITLSSVSGTKIYVNLDIDDV 993
           A++ +TLWG L  S+ ED+I  H ++++ TS   +++ + ++L S S T++Y +++I + 
Sbjct: 177 AKIRVTLWGQLAHSLNEDVIGNHTVVVV-TSTTVQEF-NGLSLRSSSATRLYTDINIPET 234

Query: 994 SK 999
            K
Sbjct: 235 WK 236


>gb|AAT81738.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|108708958|gb|ABF96753.1| hypothetical protein
            LOC_Os03g31560 [Oryza sativa Japonica Group]
          Length = 1500

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 7/241 (2%)
 Frame = +1

Query: 310  LSKLRSGTSKLKIMVRVTRMWESIHWNNNNEVLSRDLLLLDAKGTHMHAKLESKYFKEFD 489
            +S+L  G S  +I+ RV+R+W     NN+ ++   DL+LLD  GT +HA++     ++  
Sbjct: 984  ISQLSFGDSNKRILARVSRLWNFTDLNNHTKIFHTDLVLLDEMGTSIHAQIYPPITEKMK 1043

Query: 490  KLAKGDVLKEGNIYIIESFDVVLA-KAYRPVVHPFVIQFKPQTLIQSVDEEGIEIERYNF 666
             L     LKE  +Y I+SF V  A + YRPV +  +I F   T ++             F
Sbjct: 1044 PL-----LKEEKVYYIDSFTVRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPGITF 1098

Query: 667  NFIEYNTIPDKAKQRTLLSDVIXXXXXXXXXXXXXXXXXQEIVLMDTKRAEVTITLWGDL 846
            +   +  +P   ++ +    V+                 + + + D   + + +TLWG+ 
Sbjct: 1099 SLTPFEDVPSLVEKNSFY--VVGAVTTIRPKSRNAESLKRTLQIRDASNSTLPVTLWGER 1156

Query: 847  VKSIPEDII-----TQHNLIIIATSLAARDYQD-KITLSSVSGTKIYVNLDIDDVSKFKR 1008
              S   + I     TQ  +++   +L  +DY+   +TL+  S  K Y+NL+I +V++   
Sbjct: 1157 ATSFDANDIYNAGQTQAQVVVFVGTL-VKDYRGLGLTLTGSSPCKWYINLNIPEVAELNE 1215

Query: 1009 S 1011
            S
Sbjct: 1216 S 1216


>emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group]
          Length = 502

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 13/250 (5%)
 Frame = +1

Query: 310  LSKLRSGTSKLKIMVRVTRMWESIHWNNNNEVLSRDLLLLDAKGTHMHAKLESKYFKEFD 489
            +S+L  G    +I+ RV+R+W+    N +  +   DL+LLD  G  +HA++   Y    D
Sbjct: 6    ISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHTDLVLLDQMGNSIHAQI---YPPAID 62

Query: 490  KLAKGDVLKEGNIYIIESFDVVLA-KAYRPVVHPFVIQFKPQTLIQSVDEEGIEIERYNF 666
             L    +LKE  +Y I+SF V  A + YRPV +  +I F   T  +   E   +     F
Sbjct: 63   SLR--PLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPGITF 120

Query: 667  NFIEYNTIPDKAKQRTLLSDV------IXXXXXXXXXXXXXXXXXQEIVLMDTKRAEVTI 828
            +   ++ IP    +     DV      +                 + I + D   + + I
Sbjct: 121  SLTPFSDIPHLVDKTIFYVDVMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPI 180

Query: 829  TLWGDLVKSIPEDII-----TQHNLIIIATSLAARDYQD-KITLSSVSGTKIYVNLDIDD 990
            TLWG+   +   + +     TQ  +I+   +L  +DY    +T++  S  K Y+NLDI +
Sbjct: 181  TLWGERADAFDANSVYNAGQTQAQVIVFVGTL-VKDYTGLGLTVTGSSPCKWYLNLDIPE 239

Query: 991  VSKFKRSIKA 1020
            V + K S  A
Sbjct: 240  VLELKESFSA 249


>ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
            gi|357477581|ref|XP_003609076.1| Replication factor A 51
            kDa subunit [Medicago truncatula]
            gi|357477673|ref|XP_003609122.1| Replication factor A 51
            kDa subunit [Medicago truncatula]
            gi|355507966|gb|AES89108.1| Replication factor A 51 kDa
            subunit [Medicago truncatula] gi|355510131|gb|AES91273.1|
            Replication factor A 51 kDa subunit [Medicago truncatula]
            gi|355510177|gb|AES91319.1| Replication factor A 51 kDa
            subunit [Medicago truncatula]
          Length = 502

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 18/257 (7%)
 Frame = +1

Query: 310  LSKLRSGTSKLKIMVRVTRMWESIHWNNNNEVLSRDLLLLDAK------GTHMHAKLESK 471
            L+KL +     KI VRV RMW++++     E++S D++L+D K         +HA +  +
Sbjct: 23   LNKLSNAAPDTKIKVRVARMWDTLNITKKKEIISTDMVLIDEKVFINEIANCIHATIPRR 82

Query: 472  YFKEFDKLAKGDVLKEGNIYIIESFDVVLAKAYRPVV--HPFVIQFKPQTLIQSVDEEGI 645
            +     K     VL+EG IY+I  F+V   K    VV  +P ++ F    ++     +  
Sbjct: 83   FSPSLKK-----VLQEGKIYVISHFEVSKNKEKYAVVENNPSMLSFYGDAIVTEEGSDDN 137

Query: 646  EIERYNFNFIEYNTIPDKAKQRTL---LSDVIXXXXXXXXXXXXXXXXXQEIVLMDTKRA 816
             I RY F F+ +N +  +  +  L   +  +I                   + L D    
Sbjct: 138  TIPRYIFEFVNFNDLIKRCGKEVLADVIGFIIDVDPIEEKTTVNGKVDMLSLHLGDGSGN 197

Query: 817  EVTITLWGDLVKSIPEDIITQHNL-----IIIATSLAARDYQD--KITLSSVSGTKIYVN 975
             + +TLW D      + +I Q +      + I TS   + YQ   ++ +SS   T IY+N
Sbjct: 198  VLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRSTTIYIN 257

Query: 976  LDIDDVSKFKRSIKAAN 1026
            +D  +V+    S K  N
Sbjct: 258  IDTPEVADLILSSKGKN 274