BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021922
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arab...   145   3e-33
ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33

>ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/97 (71%), Positives = 83/97 (85%)
 Frame = +2

Query: 23  EKSQADWITFVAVLSACNHAGLVDLGV*YFDSIETEYGIEARPDHYACIVDLLGRAGLLN 202
           E  + DWITFVAVLSACNHAG VDLG+ YF+S+  +YG+EA+PDHY C+VDLLGR G L 
Sbjct: 322 EGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLV 381

Query: 203 KAVEVIKRMPFKPHCAIFGTLLGACRTHKNSEVAEYA 313
           +AV++IK+MPFKPH AIFGTLLGACR HKN E+AE+A
Sbjct: 382 EAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFA 418


>ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/97 (69%), Positives = 83/97 (85%)
 Frame = +2

Query: 23  EKSQADWITFVAVLSACNHAGLVDLGV*YFDSIETEYGIEARPDHYACIVDLLGRAGLLN 202
           E  + DWITFVAVL ACNHAGLVDLGV YF+++  ++GIE +P+HYAC+VDLLGRAG L+
Sbjct: 358 EGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLS 417

Query: 203 KAVEVIKRMPFKPHCAIFGTLLGACRTHKNSEVAEYA 313
           +AV++IK MPFKPH AI+GTLLGACR HKN  +AE+A
Sbjct: 418 EAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFA 454


>ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
           lyrata] gi|297315965|gb|EFH46388.1| hypothetical protein
           ARALYDRAFT_329829 [Arabidopsis lyrata subsp. lyrata]
          Length = 853

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/96 (66%), Positives = 82/96 (85%)
 Frame = +2

Query: 26  KSQADWITFVAVLSACNHAGLVDLGV*YFDSIETEYGIEARPDHYACIVDLLGRAGLLNK 205
           K++ DWITFVAVL ACNHAGLVD+G+ YFDS+  +Y +E RPDHY C+VDLLGRAG + +
Sbjct: 363 KTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHYTCMVDLLGRAGKVEE 422

Query: 206 AVEVIKRMPFKPHCAIFGTLLGACRTHKNSEVAEYA 313
           A+++I+ MPF+PH A+FGTLLGACR HKN E+AE+A
Sbjct: 423 ALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA 458


>ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|222840806|gb|EEE78353.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/92 (70%), Positives = 79/92 (85%)
 Frame = +2

Query: 38  DWITFVAVLSACNHAGLVDLGV*YFDSIETEYGIEARPDHYACIVDLLGRAGLLNKAVEV 217
           DWITFVAVL ACNHAG  DLGV YF S+  +YG+ A+PDHY C+VDLLGRAG L +AV++
Sbjct: 297 DWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDL 356

Query: 218 IKRMPFKPHCAIFGTLLGACRTHKNSEVAEYA 313
           I++MPFKPH A+FGTLLGACR HKN+E+AE+A
Sbjct: 357 IEKMPFKPHAAVFGTLLGACRIHKNTEMAEFA 388


>ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  145 bits (365), Expect = 4e-33
 Identities = 65/92 (70%), Positives = 79/92 (85%)
 Frame = +2

Query: 38  DWITFVAVLSACNHAGLVDLGV*YFDSIETEYGIEARPDHYACIVDLLGRAGLLNKAVEV 217
           DWITFVAV+ ACNHAG VDLGV YF S++ E+GIEA+P HY C++DLLGRAG L++AV +
Sbjct: 395 DWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSL 454

Query: 218 IKRMPFKPHCAIFGTLLGACRTHKNSEVAEYA 313
           IK MPFKPH AI+GTLLGACR HKN ++AE+A
Sbjct: 455 IKEMPFKPHAAIYGTLLGACRIHKNLDLAEFA 486