BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021921
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [S...    58   8e-07
ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|222840806|gb|EEE78353.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +3

Query: 426 DAGKLFGEVRQKDTVSWNSMISGYAQHGFGRKALGLFGEM 545
           D  KLF +V ++D V+WN+MISGYAQHG G+KALGLF EM
Sbjct: 250 DGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEM 289


>ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
           gi|241932461|gb|EES05606.1| hypothetical protein
           SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = +3

Query: 426 DAGKLFGEVRQKDTVSWNSMISGYAQHGFGRKALGLFGEM 545
           DA KLF E+  KD V+WN+MISGYAQHG GRKA+ LF +M
Sbjct: 286 DACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKM 325


>ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +3

Query: 429 AGKLFGEVRQKDTVSWNSMISGYAQHGFGRKALGLFGEM 545
           A KLF E+ +KD +SWN+MISGYAQHG GRKAL LF +M
Sbjct: 349 AWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKM 387


>ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +3

Query: 426 DAGKLFGEVRQKDTVSWNSMISGYAQHGFGRKALGLFGEM 545
           DA +LF ++ +KD V WN+MISGYAQHG G+KAL LF EM
Sbjct: 316 DAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEM 355


>ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = +3

Query: 429 AGKLFGEVRQKDTVSWNSMISGYAQHGFGRKALGLFGEM 545
           A KLF E+ +KD ++WN+MISGYAQHG GRKAL LF +M
Sbjct: 349 AWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKM 387