BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00021920
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518776.1| PREDICTED: uncharacterized protein LOC100806...   243   6e-62
emb|CBI27304.3| unnamed protein product [Vitis vinifera]              239   9e-61
ref|XP_002273771.1| PREDICTED: uncharacterized protein LOC100259...   236   6e-60
emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]   236   6e-60
ref|XP_003614117.1| Ribosome maturation factor rimP [Medicago tr...   226   5e-57

>ref|XP_003518776.1| PREDICTED: uncharacterized protein LOC100806065 [Glycine max]
          Length = 279

 Score =  243 bits (619), Expect = 6e-62
 Identities = 117/176 (66%), Positives = 138/176 (78%)
 Frame = -3

Query: 528 PKIXXXXXXXXXXXGETSWGQRALSIANEILLQFSDDMKIFAFKSTPRGYIYLRLDKLSD 349
           PKI               WGQRALSIA E+L+QFS+D+K+FAFK+TPRGY+Y+RLDKL+ 
Sbjct: 84  PKIGDGGDGGGVALQNVPWGQRALSIAEEVLMQFSEDIKLFAFKTTPRGYVYVRLDKLTH 143

Query: 348 KYGCPSMEQIEQYSRLYKKRLEEVGESGEIPDDLALEVSSPGGERLLMVPDDLNRFKDMP 169
           +YGCPSME++E Y++ YK RL+EVG  GEIPDDLALEVSSPG ERLL VPDD++RFKD+P
Sbjct: 144 EYGCPSMEELECYNQKYKTRLDEVGALGEIPDDLALEVSSPGAERLLKVPDDISRFKDLP 203

Query: 168 MRVSYVENNAEPKAQRKDGVFFLESIETEVEQCVWKLADVKENRDPLSKGRPMSRK 1
           MRV Y E N E     KDGVF L+SIE + E CVWKLADVKENRDPL KGRP+SRK
Sbjct: 204 MRVCYTE-NIESNCPEKDGVFLLDSIENDSEMCVWKLADVKENRDPLKKGRPLSRK 258


>emb|CBI27304.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  239 bits (609), Expect = 9e-61
 Identities = 130/249 (52%), Positives = 164/249 (65%)
 Frame = -3

Query: 747 SSSSFPRFLFHFPSKSRKQPITPFTCSISLRYFNTTKPFYNKSXXXXXXEFLSQXXXXXX 568
           SSSSF   + HF     K P +  + S +LR+ NT    +  S      ++  +      
Sbjct: 44  SSSSFSPPISHFVGFPFK-PASSLSSSPTLRFLNTNSSDHIDSKEDHPHQY--ETSEGET 100

Query: 567 XXXXXXXXXXXXDPKIXXXXXXXXXXXGETSWGQRALSIANEILLQFSDDMKIFAFKSTP 388
                       +P+I               WG+R LSIA E+LLQF  DM++F+FK+TP
Sbjct: 101 TDGWEEEEEEEVEPEIGDGGDGGGIVLQNVPWGERVLSIAREVLLQFGGDMELFSFKTTP 160

Query: 387 RGYIYLRLDKLSDKYGCPSMEQIEQYSRLYKKRLEEVGESGEIPDDLALEVSSPGGERLL 208
           RGYIY+RLDKLS+KYGCPSME+IE+Y+  YKK+L+E+G  GEIP +LA+EVSSPG ERLL
Sbjct: 161 RGYIYVRLDKLSNKYGCPSMEEIERYNLEYKKKLDEMGALGEIPHNLAIEVSSPGAERLL 220

Query: 207 MVPDDLNRFKDMPMRVSYVENNAEPKAQRKDGVFFLESIETEVEQCVWKLADVKENRDPL 28
            VPDDL+RFKDMPMRVSYVE + E +   KDGVF LESI+TE   CVWKLA+V+ENRDPL
Sbjct: 221 KVPDDLDRFKDMPMRVSYVE-DVETQCLEKDGVFMLESIKTESANCVWKLANVRENRDPL 279

Query: 27  SKGRPMSRK 1
            KGRP+SRK
Sbjct: 280 GKGRPLSRK 288


>ref|XP_002273771.1| PREDICTED: uncharacterized protein LOC100259261 [Vitis vinifera]
          Length = 223

 Score =  236 bits (602), Expect = 6e-60
 Identities = 113/158 (71%), Positives = 136/158 (86%)
 Frame = -3

Query: 474 WGQRALSIANEILLQFSDDMKIFAFKSTPRGYIYLRLDKLSDKYGCPSMEQIEQYSRLYK 295
           WG+R LSIA E+LLQF  DM++F+FK+TPRGYIY+RLDKLS+KYGCPSME+IE+Y+  YK
Sbjct: 45  WGERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYK 104

Query: 294 KRLEEVGESGEIPDDLALEVSSPGGERLLMVPDDLNRFKDMPMRVSYVENNAEPKAQRKD 115
           K+L+E+G  GEIP +LA+EVSSPG ERLL VPDDL+RFKDMPMRVSYVE + E +   KD
Sbjct: 105 KKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVE-DVETQCLEKD 163

Query: 114 GVFFLESIETEVEQCVWKLADVKENRDPLSKGRPMSRK 1
           GVF LESI+TE   CVWKLA+V+ENRDPL KGRP+SRK
Sbjct: 164 GVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRK 201


>emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]
          Length = 1721

 Score =  236 bits (602), Expect = 6e-60
 Identities = 113/158 (71%), Positives = 136/158 (86%)
 Frame = -3

Query: 474  WGQRALSIANEILLQFSDDMKIFAFKSTPRGYIYLRLDKLSDKYGCPSMEQIEQYSRLYK 295
            WG+R LSIA E+LLQF  DM++F+FK+TPRGYIY+RLDKLS+KYGCPSME+IE+Y+  YK
Sbjct: 1430 WGERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYK 1489

Query: 294  KRLEEVGESGEIPDDLALEVSSPGGERLLMVPDDLNRFKDMPMRVSYVENNAEPKAQRKD 115
            K+L+E+G  GEIP +LA+EVSSPG ERLL VPDDL+RFKDMPMRVSYVE + E +   KD
Sbjct: 1490 KKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVE-DVETQCLEKD 1548

Query: 114  GVFFLESIETEVEQCVWKLADVKENRDPLSKGRPMSRK 1
            GVF LESI+TE   CVWKLA+V+ENRDPL KGRP+SRK
Sbjct: 1549 GVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRK 1586


>ref|XP_003614117.1| Ribosome maturation factor rimP [Medicago truncatula]
           gi|355515452|gb|AES97075.1| Ribosome maturation factor
           rimP [Medicago truncatula]
          Length = 282

 Score =  226 bits (577), Expect = 5e-57
 Identities = 109/176 (61%), Positives = 135/176 (76%)
 Frame = -3

Query: 528 PKIXXXXXXXXXXXGETSWGQRALSIANEILLQFSDDMKIFAFKSTPRGYIYLRLDKLSD 349
           PKI               WGQRA SIA E+L+QFS+D+K+FAFK++PRGY+Y+RLDKL+ 
Sbjct: 87  PKIGDGGNGGGVVLQNVPWGQRAHSIAEEVLVQFSEDLKLFAFKTSPRGYVYVRLDKLTT 146

Query: 348 KYGCPSMEQIEQYSRLYKKRLEEVGESGEIPDDLALEVSSPGGERLLMVPDDLNRFKDMP 169
           KYGCPSME+++ Y++ +KKRL+EVG  GEIPDDL LEVSSPG +R+L VPDDLNRFK+MP
Sbjct: 147 KYGCPSMEELDSYNQEFKKRLDEVGALGEIPDDLGLEVSSPGLDRILKVPDDLNRFKEMP 206

Query: 168 MRVSYVENNAEPKAQRKDGVFFLESIETEVEQCVWKLADVKENRDPLSKGRPMSRK 1
           MRV Y E N E   +  DGVF L+SIE + E CVWKLADVKENRD   KG+P++RK
Sbjct: 207 MRVCYAE-NIESNCREVDGVFLLDSIEIDSEVCVWKLADVKENRDATIKGKPLNRK 261